AMTR_s00053p00046800 (evm_27.TU.AmTr_v1.0_sc...)

Aliases : evm_27.TU.AmTr_v1.0_scaffold00053.24

Description : Probable magnesium transporter NIPA3 OS=Arabidopsis thaliana

Gene families : OG0000631 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000631_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AMTR_s00053p00046800
Cluster	HCCA: Cluster_14

Target	Alias	Description	ECC score	Gene Family Method
Aspi01Gene52590.t1	Aspi01Gene52590	solute transporter *(NIPA) & original description: none	0.02	OrthoFinder output from all 47 species
Azfi_s0216.g058492	No alias	solute transporter *(NIPA) & original description: CDS=110-577	0.02	OrthoFinder output from all 47 species
Ceric.23G053700.1	Ceric.23G053700	solute transporter *(NIPA) & original description:...	0.02	OrthoFinder output from all 47 species
Dde_g02761	No alias	solute transporter *(NIPA) & original description: none	0.03	OrthoFinder output from all 47 species
LOC_Os01g65986.1	LOC_Os01g65986	Probable magnesium transporter NIPA4 OS=Arabidopsis...	0.03	OrthoFinder output from all 47 species
LOC_Os05g43790.1	LOC_Os05g43790	Probable magnesium transporter NIPA3 OS=Arabidopsis...	0.02	OrthoFinder output from all 47 species
Len_g10923	No alias	solute transporter *(NIPA) & original description: none	0.05	OrthoFinder output from all 47 species
Len_g17108	No alias	solute transporter *(NIPA) & original description: none	0.02	OrthoFinder output from all 47 species
Zm00001e021361_P002	Zm00001e021361	Probable magnesium transporter NIPA4 OS=Arabidopsis...	0.04	OrthoFinder output from all 47 species
Zm00001e027029_P001	Zm00001e027029	Probable magnesium transporter NIPA3 OS=Arabidopsis...	0.04	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005215	transporter activity	None	Extended
CC	GO:0005575	cellular_component	None	Extended
BP	GO:0006810	transport	None	Extended
BP	GO:0006811	monoatomic ion transport	None	Extended
BP	GO:0006812	monoatomic cation transport	None	Extended
BP	GO:0008150	biological_process	None	Extended
MF	GO:0008324	monoatomic cation transmembrane transporter activity	None	Extended
MF	GO:0015075	monoatomic ion transmembrane transporter activity	None	Extended
MF	GO:0015095	magnesium ion transmembrane transporter activity	IEA	Interproscan
MF	GO:0015318	inorganic molecular entity transmembrane transporter activity	None	Extended
BP	GO:0015693	magnesium ion transport	IEA	Interproscan
CC	GO:0016020	membrane	IEA	Interproscan
MF	GO:0022857	transmembrane transporter activity	None	Extended
MF	GO:0022890	inorganic cation transmembrane transporter activity	None	Extended
BP	GO:0030001	metal ion transport	None	Extended
MF	GO:0046873	metal ion transmembrane transporter activity	None	Extended
BP	GO:0051179	localization	None	Extended
BP	GO:0051234	establishment of localization	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0003677	DNA binding	IEP	HCCA
CC	GO:0005622	intracellular anatomical structure	IEP	HCCA
BP	GO:0006351	DNA-templated transcription	IEP	HCCA
BP	GO:0006886	intracellular protein transport	IEP	HCCA
BP	GO:0008104	protein localization	IEP	HCCA
BP	GO:0015031	protein transport	IEP	HCCA
BP	GO:0032774	RNA biosynthetic process	IEP	HCCA
BP	GO:0033036	macromolecule localization	IEP	HCCA
BP	GO:0045184	establishment of protein localization	IEP	HCCA
BP	GO:0046907	intracellular transport	IEP	HCCA
BP	GO:0051649	establishment of localization in cell	IEP	HCCA
BP	GO:0070727	cellular macromolecule localization	IEP	HCCA
BP	GO:0071705	nitrogen compound transport	IEP	HCCA
BP	GO:0097659	nucleic acid-templated transcription	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR008521	Mg_trans_NIPA	4	300

External Links

No external refs found!