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  5. AMTR_s00052p00205770

AMTR_s00052p00205770 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00052.106

Description : Eukaryotic translation initiation factor 3 subunit I OS=Arabidopsis thaliana


Gene families : OG0003072 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003072_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00052p00205770
Cluster HCCA: Cluster_64

Target Alias Description ECC score Gene Family Method Actions
Aop_g00582 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e037354_P001 Zm00001e037354 Eukaryotic translation initiation factor 3 subunit I... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0005856 cytoskeleton IEP HCCA
BP GO:0005996 monosaccharide metabolic process IEP HCCA
BP GO:0006012 galactose metabolic process IEP HCCA
BP GO:0006801 superoxide metabolic process IEP HCCA
BP GO:0006808 regulation of nitrogen utilization IEP HCCA
BP GO:0006810 transport IEP HCCA
BP GO:0006909 phagocytosis IEP HCCA
MF GO:0008108 UDP-glucose:hexose-1-phosphate uridylyltransferase activity IEP HCCA
MF GO:0008113 peptide-methionine (S)-S-oxide reductase activity IEP HCCA
BP GO:0016192 vesicle-mediated transport IEP HCCA
MF GO:0016667 oxidoreductase activity, acting on a sulfur group of donors IEP HCCA
MF GO:0016671 oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor IEP HCCA
BP GO:0019318 hexose metabolic process IEP HCCA
CC GO:0030119 AP-type membrane coat adaptor complex IEP HCCA
CC GO:0030131 clathrin adaptor complex IEP HCCA
MF GO:0030234 enzyme regulator activity IEP HCCA
BP GO:0032101 regulation of response to external stimulus IEP HCCA
BP GO:0032104 regulation of response to extracellular stimulus IEP HCCA
BP GO:0032107 regulation of response to nutrient levels IEP HCCA
BP GO:0048583 regulation of response to stimulus IEP HCCA
BP GO:0051179 localization IEP HCCA
BP GO:0051234 establishment of localization IEP HCCA
MF GO:0070569 uridylyltransferase activity IEP HCCA
BP GO:0072593 reactive oxygen species metabolic process IEP HCCA
MF GO:0098772 molecular function regulator activity IEP HCCA
InterPro domains Description Start Stop
IPR001680 WD40_repeat 11 41
IPR001680 WD40_repeat 181 214
IPR001680 WD40_repeat 54 89
IPR001680 WD40_repeat 145 174
IPR001680 WD40_repeat 100 130
IPR001680 WD40_repeat 263 297
No external refs found!