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  5. AMTR_s00050p00227710

AMTR_s00050p00227710 (CCD8, ATCCD8, MAX4,...)


Aliases : CCD8, ATCCD8, MAX4, evm_27.TU.AmTr_v1.0_scaffold00050.103

Description : Phytohormones.strigolactone.synthesis.CCD8 carotenoid cleavage dioxygenase


Gene families : OG0004707 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004707_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00050p00227710

Target Alias Description ECC score Gene Family Method Actions
AT4G32810 CCD8, ATCCD8, MAX4 carotenoid cleavage dioxygenase 8 0.04 OrthoFinder output from all 47 species
Ala_g24764 CCD8, ATCCD8, MAX4 carotenoid cleavage dioxygenase *(CCD8) & original... 0.04 OrthoFinder output from all 47 species
Aob_g29470 CCD8, ATCCD8, MAX4 carotenoid cleavage dioxygenase *(CCD8) & original... 0.03 OrthoFinder output from all 47 species
Dac_g36929 CCD8, ATCCD8, MAX4 carotenoid cleavage dioxygenase *(CCD8) & original... 0.03 OrthoFinder output from all 47 species
LOC_Os01g38580.1 CCD8, ATCCD8,... carotenoid cleavage dioxygenase (CCD8) 0.04 OrthoFinder output from all 47 species
LOC_Os01g54270.1 CCD8, ATCCD8,... carotenoid cleavage dioxygenase (CCD8) 0.02 OrthoFinder output from all 47 species
Len_g09876 CCD8, ATCCD8, MAX4 carotenoid cleavage dioxygenase *(CCD8) & original... 0.06 OrthoFinder output from all 47 species
Ore_g38821 CCD8, ATCCD8, MAX4 carotenoid cleavage dioxygenase *(CCD8) & original... 0.02 OrthoFinder output from all 47 species
Pnu_g27881 CCD8, ATCCD8, MAX4 carotenoid cleavage dioxygenase *(CCD8) & original... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0008168 methyltransferase activity IEP HCCA
MF GO:0008171 O-methyltransferase activity IEP HCCA
MF GO:0016706 2-oxoglutarate-dependent dioxygenase activity IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016741 transferase activity, transferring one-carbon groups IEP HCCA
MF GO:0016746 acyltransferase activity IEP HCCA
MF GO:0016747 acyltransferase activity, transferring groups other than amino-acyl groups IEP HCCA
MF GO:0051213 dioxygenase activity IEP HCCA
InterPro domains Description Start Stop
IPR004294 Carotenoid_Oase 71 552
No external refs found!