Aliases : OPCL1, evm_27.TU.AmTr_v1.0_scaffold00050.38
Description : 4-coumarate--CoA ligase-like 5 OS=Arabidopsis thaliana
Gene families : OG0000359 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000359_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: AMTR_s00050p00171700 | |
Cluster | HCCA: Cluster_58 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
Adi_g079290 | OPCL1 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
LOC_Os03g04000.1 | OPCL1, LOC_Os03g04000 | OPC-8:CoA synthetase | 0.02 | OrthoFinder output from all 47 species | |
Nbi_g16903 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Smo177466 | OPCL1 | 4-coumarate--CoA ligase-like 5 OS=Arabidopsis thaliana | 0.04 | OrthoFinder output from all 47 species | |
Smo231716 | No alias | 4-coumarate--CoA ligase-like 7 OS=Arabidopsis thaliana | 0.03 | OrthoFinder output from all 47 species | |
Smo85691 | No alias | 4-coumarate--CoA ligase-like 7 OS=Arabidopsis thaliana | 0.03 | OrthoFinder output from all 47 species | |
Solyc08g076300.3.1 | Solyc08g076300 | 4-coumarate--CoA ligase-like 6 OS=Arabidopsis thaliana... | 0.04 | OrthoFinder output from all 47 species | |
Spa_g20791 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003824 | catalytic activity | IEA | Interproscan |
BP | GO:0008152 | metabolic process | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0004252 | serine-type endopeptidase activity | IEP | HCCA |
BP | GO:0006855 | xenobiotic transmembrane transport | IEP | HCCA |
MF | GO:0015291 | secondary active transmembrane transporter activity | IEP | HCCA |
MF | GO:0015297 | antiporter activity | IEP | HCCA |
MF | GO:0016706 | 2-oxoglutarate-dependent dioxygenase activity | IEP | HCCA |
MF | GO:0030246 | carbohydrate binding | IEP | HCCA |
MF | GO:0030247 | polysaccharide binding | IEP | HCCA |
MF | GO:0042802 | identical protein binding | IEP | HCCA |
BP | GO:0042908 | xenobiotic transport | IEP | HCCA |
BP | GO:0043086 | negative regulation of catalytic activity | IEP | HCCA |
BP | GO:0044092 | negative regulation of molecular function | IEP | HCCA |
BP | GO:0050790 | regulation of catalytic activity | IEP | HCCA |
MF | GO:0051213 | dioxygenase activity | IEP | HCCA |
BP | GO:0065009 | regulation of molecular function | IEP | HCCA |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR000873 | AMP-dep_Synth/Lig_com | 70 | 482 |
No external refs found! |