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  5. AMTR_s00050p00129660

AMTR_s00050p00129660 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00050.28

Description : ACT domain-containing protein ACR10 OS=Arabidopsis thaliana


Gene families : OG0001414 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001414_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00050p00129660

Target Alias Description ECC score Gene Family Method Actions
AT2G39570 No alias ACT domain-containing protein 0.03 OrthoFinder output from all 47 species
Adi_g007437 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g61434 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g08436 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g26162 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g20686 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g13361 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g25317 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0008152 metabolic process IEA Interproscan
MF GO:0016597 amino acid binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000375 RNA splicing, via transesterification reactions IEP HCCA
BP GO:0000377 RNA splicing, via transesterification reactions with bulged adenosine as nucleophile IEP HCCA
BP GO:0000398 mRNA splicing, via spliceosome IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003743 translation initiation factor activity IEP HCCA
MF GO:0005515 protein binding IEP HCCA
BP GO:0006397 mRNA processing IEP HCCA
BP GO:0006413 translational initiation IEP HCCA
MF GO:0008135 translation factor activity, RNA binding IEP HCCA
BP GO:0008380 RNA splicing IEP HCCA
BP GO:0009987 cellular process IEP HCCA
BP GO:0016071 mRNA metabolic process IEP HCCA
MF GO:0030246 carbohydrate binding IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
MF GO:0045182 translation regulator activity IEP HCCA
MF GO:0090079 translation regulator activity, nucleic acid binding IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR002912 ACT_dom 113 169
No external refs found!