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  5. AMTR_s00049p00103660

AMTR_s00049p00103660 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00049.78

Description : Putative pentatricopeptide repeat-containing protein At1g77010, mitochondrial OS=Arabidopsis thaliana


Gene families : OG0038195 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00049p00103660
Cluster HCCA: Cluster_78

Target Alias Description ECC score Gene Family Method Actions
MA_197257g0010 No alias Pentatricopeptide repeat-containing protein At2g22070... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 499 545
IPR002885 Pentatricopeptide_repeat 264 312
IPR002885 Pentatricopeptide_repeat 208 232
IPR002885 Pentatricopeptide_repeat 43 70
IPR002885 Pentatricopeptide_repeat 573 596
IPR002885 Pentatricopeptide_repeat 135 159
IPR002885 Pentatricopeptide_repeat 369 396
IPR002885 Pentatricopeptide_repeat 103 131
IPR002885 Pentatricopeptide_repeat 645 667
IPR002885 Pentatricopeptide_repeat 472 492
IPR002885 Pentatricopeptide_repeat 238 261
IPR002885 Pentatricopeptide_repeat 399 425
IPR002885 Pentatricopeptide_repeat 72 99
No external refs found!