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  5. AMTR_s00049p00095740

AMTR_s00049p00095740 (ELP3, AtELP3, HAG3,...)


Aliases : ELP3, AtELP3, HAG3, ELO3, HAC8, evm_27.TU.AmTr_v1.0_scaffold00049.65

Description : RNA biosynthesis.RNA polymerase II-dependent transcription.ELONGATOR transcription elongation complex.ELP3 component


Gene families : OG0005089 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005089_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00049p00095740

Target Alias Description ECC score Gene Family Method Actions
Aop_g03215 ELP3, AtELP3,... EC_2.3 acyltransferase & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g04696 ELP3, AtELP3,... EC_2.3 acyltransferase & original description: none 0.02 OrthoFinder output from all 47 species
MA_8986g0010 ELP3, AtELP3,... Elongator complex protein 3 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Smo412706 ELP3, AtELP3,... Elongator complex protein 3 OS=Oryza sativa subsp. japonica 0.02 OrthoFinder output from all 47 species
Tin_g07792 ELP3, AtELP3,... EC_2.3 acyltransferase & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEA Interproscan
MF GO:0008080 N-acetyltransferase activity IEA Interproscan
MF GO:0051536 iron-sulfur cluster binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003684 damaged DNA binding IEP HCCA
BP GO:0006281 DNA repair IEP HCCA
BP GO:0006289 nucleotide-excision repair IEP HCCA
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP HCCA
BP GO:0006974 cellular response to DNA damage stimulus IEP HCCA
BP GO:0010498 proteasomal protein catabolic process IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
BP GO:0019941 modification-dependent protein catabolic process IEP HCCA
BP GO:0030163 protein catabolic process IEP HCCA
BP GO:0033554 cellular response to stress IEP HCCA
BP GO:0043161 proteasome-mediated ubiquitin-dependent protein catabolic process IEP HCCA
BP GO:0043632 modification-dependent macromolecule catabolic process IEP HCCA
BP GO:0044260 cellular macromolecule metabolic process IEP HCCA
BP GO:0051603 proteolysis involved in protein catabolic process IEP HCCA
BP GO:0051716 cellular response to stimulus IEP HCCA
BP GO:1901565 organonitrogen compound catabolic process IEP HCCA
InterPro domains Description Start Stop
IPR007197 rSAM 121 313
IPR000182 GNAT_dom 462 555
No external refs found!