AMTR_s00048p00233710 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00048.233

No description available


Gene families : OG0007426 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0007426_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00048p00233710

Target Alias Description ECC score Gene Family Method Actions
Adi_g022403 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g20006 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Als_g52011 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene10109.t1 Aspi01Gene10109 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.02G008200.1 Ceric.02G008200 not classified & original description: pacid=50584449... 0.06 OrthoFinder output from all 47 species
Dcu_g05000 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dde_g16816 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01019298001 No alias No description available 0.07 OrthoFinder output from all 47 species
Lfl_g11981 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_140403g0010 No alias no hits & (original description: none) 0.07 OrthoFinder output from all 47 species
MA_169132g0010 No alias no hits & (original description: none) 0.07 OrthoFinder output from all 47 species
Mp5g13240.1 No alias no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Ore_g19202 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g08434 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g24538 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Solyc01g081430.4.1 Solyc01g081430 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Zm00001e002523_P001 Zm00001e002523 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0000155 phosphorelay sensor kinase activity IEP HCCA
MF GO:0000156 phosphorelay response regulator activity IEP HCCA
BP GO:0000160 phosphorelay signal transduction system IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0004180 carboxypeptidase activity IEP HCCA
MF GO:0004181 metallocarboxypeptidase activity IEP HCCA
MF GO:0004673 protein histidine kinase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
CC GO:0005643 nuclear pore IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
BP GO:0006357 regulation of transcription by RNA polymerase II IEP HCCA
MF GO:0008144 obsolete drug binding IEP HCCA
MF GO:0008235 metalloexopeptidase activity IEP HCCA
MF GO:0008237 metallopeptidase activity IEP HCCA
MF GO:0008238 exopeptidase activity IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
CC GO:0016592 mediator complex IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP HCCA
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP HCCA
MF GO:0016775 phosphotransferase activity, nitrogenous group as acceptor IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
MF GO:0043531 ADP binding IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
MF GO:0060089 molecular transducer activity IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
MF GO:0140299 small molecule sensor activity IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA

No InterPro domains available for this sequence

No external refs found!