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  5. AMTR_s00048p00225900

AMTR_s00048p00225900 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00048.218

Description : RNA biosynthesis.transcriptional activation.Trihelix transcription factor


Gene families : OG0001890 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001890_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00048p00225900
Cluster HCCA: Cluster_24

Target Alias Description ECC score Gene Family Method Actions
Aob_g12849 No alias Trihelix-type transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene40808.t1 Aspi01Gene40808 Trihelix-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01036939001 No alias RNA biosynthesis.transcriptional activation.Trihelix... 0.11 OrthoFinder output from all 47 species
Gb_30009 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
MF GO:0140110 transcription regulator activity IEP HCCA

No InterPro domains available for this sequence

No external refs found!