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  5. AMTR_s00048p00085290

AMTR_s00048p00085290 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00048.41

Description : Plastid lipid-associated protein 3, chloroplastic OS=Brassica campestris


Gene families : OG0002240 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002240_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00048p00085290

Target Alias Description ECC score Gene Family Method Actions
AT2G35490 No alias Plastid-lipid associated protein PAP / fibrillin family protein 0.05 OrthoFinder output from all 47 species
Adi_g113977 FIB Fibrillin plastoglobule core protein *(FBN1/2) &... 0.04 OrthoFinder output from all 47 species
Adi_g113978 No alias Fibrillin plastoglobule core protein *(FBN1/2) &... 0.04 OrthoFinder output from all 47 species
Aev_g10976 No alias Fibrillin plastoglobule core protein *(FBN1/2) &... 0.03 OrthoFinder output from all 47 species
Aev_g39447 No alias Fibrillin plastoglobule core protein *(FBN1/2) &... 0.02 OrthoFinder output from all 47 species
Ala_g03723 FIB Fibrillin plastoglobule core protein *(FBN1/2) &... 0.03 OrthoFinder output from all 47 species
Aob_g19138 No alias Fibrillin plastoglobule core protein *(FBN1/2) &... 0.02 OrthoFinder output from all 47 species
Cba_g01687 FIB Fibrillin plastoglobule core protein *(FBN1/2) &... 0.04 OrthoFinder output from all 47 species
Cpa|evm.model.tig00020943.18 No alias Plastoglobulin-1, chloroplastic OS=Pisum sativum 0.01 OrthoFinder output from all 47 species
Cre03.g189300 FIB Plastid lipid-associated protein 2, chloroplastic... 0.02 OrthoFinder output from all 47 species
Dac_g17027 FIB Fibrillin plastoglobule core protein *(FBN1/2) &... 0.04 OrthoFinder output from all 47 species
Dde_g12841 FIB Fibrillin plastoglobule core protein *(FBN1/2) &... 0.03 OrthoFinder output from all 47 species
Ehy_g08272 FIB Fibrillin plastoglobule core protein *(FBN1/2) &... 0.02 OrthoFinder output from all 47 species
GSVIVT01013072001 No alias Probable plastid-lipid-associated protein 3,... 0.07 OrthoFinder output from all 47 species
LOC_Os09g04790.1 LOC_Os09g04790 Probable plastid-lipid-associated protein 2,... 0.05 OrthoFinder output from all 47 species
MA_153977g0010 No alias Plastid-lipid-associated protein, chloroplastic... 0.07 OrthoFinder output from all 47 species
MA_28715g0010 No alias Light-induced protein, chloroplastic OS=Solanum... 0.06 OrthoFinder output from all 47 species
Mp4g14500.1 No alias Probable plastid-lipid-associated protein 2,... 0.02 OrthoFinder output from all 47 species
Msp_g09485 No alias Fibrillin plastoglobule core protein *(FBN1/2) &... 0.02 OrthoFinder output from all 47 species
Ore_g45290 No alias Fibrillin plastoglobule core protein *(FBN1/2) &... 0.04 OrthoFinder output from all 47 species
Pir_g09372 No alias Fibrillin plastoglobule core protein *(FBN1/2) &... 0.02 OrthoFinder output from all 47 species
Ppi_g09162 FIB Fibrillin plastoglobule core protein *(FBN1/2) &... 0.03 OrthoFinder output from all 47 species
Sam_g29401 No alias Fibrillin plastoglobule core protein *(FBN1/2) &... 0.03 OrthoFinder output from all 47 species
Zm00001e002454_P001 Zm00001e002454 Probable plastid-lipid-associated protein 3,... 0.05 OrthoFinder output from all 47 species
Zm00001e007939_P001 Zm00001e007939 Probable plastid-lipid-associated protein 2,... 0.07 OrthoFinder output from all 47 species
Zm00001e040997_P002 Zm00001e040997 Probable plastid-lipid-associated protein 2,... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005198 structural molecule activity IEA Interproscan
CC GO:0009507 chloroplast IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEP HCCA
BP GO:0006081 cellular aldehyde metabolic process IEP HCCA
BP GO:0006090 pyruvate metabolic process IEP HCCA
BP GO:0006508 proteolysis IEP HCCA
BP GO:0006644 phospholipid metabolic process IEP HCCA
MF GO:0008113 peptide-methionine (S)-S-oxide reductase activity IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
MF GO:0008233 peptidase activity IEP HCCA
MF GO:0008234 cysteine-type peptidase activity IEP HCCA
BP GO:0008654 phospholipid biosynthetic process IEP HCCA
BP GO:0009240 isopentenyl diphosphate biosynthetic process IEP HCCA
MF GO:0009916 alternative oxidase activity IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016667 oxidoreductase activity, acting on a sulfur group of donors IEP HCCA
MF GO:0016671 oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor IEP HCCA
MF GO:0016679 oxidoreductase activity, acting on diphenols and related substances as donors IEP HCCA
MF GO:0016682 oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor IEP HCCA
BP GO:0019288 isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
BP GO:0019682 glyceraldehyde-3-phosphate metabolic process IEP HCCA
MF GO:0019843 rRNA binding IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
MF GO:0046422 violaxanthin de-epoxidase activity IEP HCCA
BP GO:0046490 isopentenyl diphosphate metabolic process IEP HCCA
MF GO:0050662 obsolete coenzyme binding IEP HCCA
BP GO:0055114 obsolete oxidation-reduction process IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR006843 PAP/fibrillin_dom 255 469
No external refs found!