Aliases : THO7, AtTHO7, evm_27.TU.AmTr_v1.0_scaffold00048.32
Description : RNA processing.messenger ribonucleoprotein particle (mRNP).mRNP export.TREX/THO mRNP trafficking complex.THO subcomplex.THOC7 component
Gene families : OG0004772 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004772_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: AMTR_s00048p00073350 | |
Cluster | HCCA: Cluster_32 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
Aob_g04944 | THO7, AtTHO7 | component *(THOC7) of mRNP trafficking THO subcomplex &... | 0.04 | OrthoFinder output from all 47 species | |
Sacu_v1.1_s0054.g014285 | THO7, AtTHO7 | component *(THOC7) of mRNP trafficking THO subcomplex &... | 0.02 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
CC | GO:0000445 | THO complex part of transcription export complex | IEA | Interproscan |
BP | GO:0006397 | mRNA processing | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003824 | catalytic activity | IEP | HCCA |
MF | GO:0004616 | phosphogluconate dehydrogenase (decarboxylating) activity | IEP | HCCA |
BP | GO:0006091 | generation of precursor metabolites and energy | IEP | HCCA |
BP | GO:0006098 | pentose-phosphate shunt | IEP | HCCA |
BP | GO:0006163 | purine nucleotide metabolic process | IEP | HCCA |
BP | GO:0006739 | NADP metabolic process | IEP | HCCA |
BP | GO:0006740 | NADPH regeneration | IEP | HCCA |
BP | GO:0006753 | nucleoside phosphate metabolic process | IEP | HCCA |
BP | GO:0006793 | phosphorus metabolic process | IEP | HCCA |
BP | GO:0006796 | phosphate-containing compound metabolic process | IEP | HCCA |
BP | GO:0009117 | nucleotide metabolic process | IEP | HCCA |
MF | GO:0016614 | oxidoreductase activity, acting on CH-OH group of donors | IEP | HCCA |
MF | GO:0016616 | oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor | IEP | HCCA |
MF | GO:0016810 | hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds | IEP | HCCA |
BP | GO:0019362 | pyridine nucleotide metabolic process | IEP | HCCA |
BP | GO:0019637 | organophosphate metabolic process | IEP | HCCA |
BP | GO:0046496 | nicotinamide nucleotide metabolic process | IEP | HCCA |
BP | GO:0051156 | glucose 6-phosphate metabolic process | IEP | HCCA |
BP | GO:0055086 | nucleobase-containing small molecule metabolic process | IEP | HCCA |
BP | GO:0072521 | purine-containing compound metabolic process | IEP | HCCA |
BP | GO:0072524 | pyridine-containing compound metabolic process | IEP | HCCA |
BP | GO:1901135 | carbohydrate derivative metabolic process | IEP | HCCA |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR008501 | THOC7/Mft1 | 29 | 164 |
No external refs found! |