AMTR_s00048p00046670 (PGP2,...)

Aliases : PGP2, evm_27.TU.AmTr_v1.0_scaffold00048.15

Description : Solute transport.primary active transport.ABC superfamily.ABC1 family.subfamily ABCB transporter

Gene families : OG0000048 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AMTR_s00048p00046670
Cluster	HCCA: Cluster_106

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00010p00254310	ABCB19,...	Solute transport.primary active transport.ABC...	0.04	OrthoFinder output from all 47 species
AMTR_s00090p00165440	evm_27.TU.AmTr_v1...	Solute transport.primary active transport.ABC...	0.04	OrthoFinder output from all 47 species
AT1G27940	PGP13	P-glycoprotein 13	0.05	OrthoFinder output from all 47 species
AT1G28010	ABCB14, ATABCB14, PGP14	P-glycoprotein 14	0.03	OrthoFinder output from all 47 species
AT4G25960	PGP2	P-glycoprotein 2	0.03	OrthoFinder output from all 47 species
Adi_g010407	PGP2	subfamily ABCB transporter & original description: none	0.03	OrthoFinder output from all 47 species
Adi_g010452	ABCB19,...	subfamily ABCB transporter & original description: none	0.02	OrthoFinder output from all 47 species
Adi_g021749	ABCB19,...	subfamily ABCB transporter & original description: none	0.03	OrthoFinder output from all 47 species
Adi_g103595	ABCB19,...	subfamily ABCB transporter & original description: none	0.03	OrthoFinder output from all 47 species
Adi_g113233	PGP2	subfamily ABCB transporter & original description: none	0.03	OrthoFinder output from all 47 species
Aev_g20821	PGP11	subfamily ABCB transporter & original description: none	0.03	OrthoFinder output from all 47 species
Aev_g39147	No alias	subfamily ABCB transporter & original description: none	0.03	OrthoFinder output from all 47 species
Ala_g15212	PGP13	subfamily ABCB transporter & original description: none	0.03	OrthoFinder output from all 47 species
Ala_g17861	ABCB19,...	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Ala_g24244	ABCB19,...	subfamily ABCB transporter & original description: none	0.03	OrthoFinder output from all 47 species
Ala_g25151	PGP2	subfamily ABCB transporter & original description: none	0.03	OrthoFinder output from all 47 species
Ala_g36024	ABCB19,...	subfamily ABCB transporter & original description: none	0.03	OrthoFinder output from all 47 species
Als_g05763	ABCB19,...	subfamily ABCB transporter & original description: none	0.04	OrthoFinder output from all 47 species
Als_g07131	ABCB19,...	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Als_g07510	PGP11	subfamily ABCB transporter & original description: none	0.04	OrthoFinder output from all 47 species
Als_g07511	ABCB19,...	subfamily ABCB transporter & original description: none	0.02	OrthoFinder output from all 47 species
Als_g14091	ATPGP4, PGP4, ABCB4, MDR4	subfamily ABCB transporter & original description: none	0.04	OrthoFinder output from all 47 species
Als_g14092	PGP21	subfamily ABCB transporter & original description: none	0.03	OrthoFinder output from all 47 species
Als_g14692	ABCB19,...	subfamily ABCB transporter & original description: none	0.03	OrthoFinder output from all 47 species
Als_g18810	PGP2	subfamily ABCB transporter & original description: none	0.03	OrthoFinder output from all 47 species
Aop_g11005	PGP11	subfamily ABCB transporter & original description: none	0.05	OrthoFinder output from all 47 species
Aop_g18063	ABCB19,...	subfamily ABCB transporter & original description: none	0.03	OrthoFinder output from all 47 species
Aop_g22258	PGP2	subfamily ABCB transporter & original description: none	0.05	OrthoFinder output from all 47 species
Aop_g32929	ABCB19,...	subfamily ABCB transporter & original description: none	0.03	OrthoFinder output from all 47 species
Aop_g36046	ABCB19,...	subfamily ABCB transporter & original description: none	0.02	OrthoFinder output from all 47 species
Aspi01Gene12320.t2	PGP2, Aspi01Gene12320	subfamily ABCB transporter & original description: none	0.02	OrthoFinder output from all 47 species
Aspi01Gene40552.t1	PGP1, ABCB1,...	subfamily ABCB transporter & original description: none	0.03	OrthoFinder output from all 47 species
Aspi01Gene42787.t1	ATPGP4, PGP4,...	subfamily ABCB transporter & original description: none	0.02	OrthoFinder output from all 47 species
Aspi01Gene45620.t1	PGP11, Aspi01Gene45620	subfamily ABCB transporter & original description: none	0.03	OrthoFinder output from all 47 species
Aspi01Gene46795.t1	PGP2, Aspi01Gene46795	subfamily ABCB transporter & original description: none	0.03	OrthoFinder output from all 47 species
Aspi01Gene52651.t1	PGP2, Aspi01Gene52651	subfamily ABCB transporter & original description: none	0.03	OrthoFinder output from all 47 species
Aspi01Gene62055.t1	ABCB19,...	subfamily ABCB transporter & original description: none	0.02	OrthoFinder output from all 47 species
Azfi_s0114.g046165	PGP2	subfamily ABCB transporter & original description: CDS=242-4291	0.03	OrthoFinder output from all 47 species
Azfi_s0232.g059284	PGP13	subfamily ABCB transporter & original description: CDS=307-4314	0.05	OrthoFinder output from all 47 species
Cba_g01329	PGP2	subfamily ABCB transporter & original description: none	0.04	OrthoFinder output from all 47 species
Cba_g07645	PGP13	subfamily ABCB transporter & original description: none	0.03	OrthoFinder output from all 47 species
Ceric.18G013800.1	Ceric.18G013800	subfamily ABCB transporter & original description:...	0.02	OrthoFinder output from all 47 species
Ceric.35G032800.1	ABCB19,...	subfamily ABCB transporter & original description:...	0.07	OrthoFinder output from all 47 species
Dac_g06724	PGP2	subfamily ABCB transporter & original description: none	0.03	OrthoFinder output from all 47 species
Dac_g06939	PGP13	subfamily ABCB transporter & original description: none	0.04	OrthoFinder output from all 47 species
Dac_g14063	PGP11	subfamily ABCB transporter & original description: none	0.05	OrthoFinder output from all 47 species
Dac_g35993	PGP11	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Dac_g40237	ABCB19,...	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Dcu_g03201	ABCB19,...	subfamily ABCB transporter & original description: none	0.02	OrthoFinder output from all 47 species
Dcu_g08658	PGP6	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Dcu_g12428	PGP2	subfamily ABCB transporter & original description: none	0.04	OrthoFinder output from all 47 species
Dcu_g20621	PGP2	subfamily ABCB transporter & original description: none	0.06	OrthoFinder output from all 47 species
Dcu_g40826	PGP2	subfamily ABCB transporter & original description: none	0.05	OrthoFinder output from all 47 species
Dde_g28161	PGP11	subfamily ABCB transporter & original description: none	0.02	OrthoFinder output from all 47 species
Dde_g30302	PGP2	subfamily ABCB transporter & original description: none	0.02	OrthoFinder output from all 47 species
Dde_g30303	PGP2	subfamily ABCB transporter & original description: none	0.04	OrthoFinder output from all 47 species
Dde_g31525	ATPGP4, PGP4, ABCB4, MDR4	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Dde_g46023	PGP13	subfamily ABCB transporter & original description: none	0.02	OrthoFinder output from all 47 species
Ehy_g17218	ABCB19,...	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Ehy_g28462	PGP2	subfamily ABCB transporter & original description: none	0.02	OrthoFinder output from all 47 species
GSVIVT01021366001	PGP9	Solute transport.primary active transport.ABC...	0.03	OrthoFinder output from all 47 species
Gb_08615	PGP11	ABC transporter B family member 4 OS=Arabidopsis...	0.02	OrthoFinder output from all 47 species
Gb_13906	PGP2	subfamily ABCB transporter	0.04	OrthoFinder output from all 47 species
Gb_13910	PGP2	ABC transporter B family member 2 OS=Arabidopsis...	0.03	OrthoFinder output from all 47 species
LOC_Os02g46680.1	PGP2, LOC_Os02g46680	subfamily ABCB transporter	0.05	OrthoFinder output from all 47 species
LOC_Os04g38570.1	ABCB19,...	auxin efflux transporter (ABCB19)	0.03	OrthoFinder output from all 47 species
Len_g19149	PGP2	subfamily ABCB transporter & original description: none	0.03	OrthoFinder output from all 47 species
MA_126766g0010	PGP2	subfamily ABCB transporter	0.06	OrthoFinder output from all 47 species
MA_141308g0010	ABCB19,...	ABC transporter B family member 19 OS=Arabidopsis...	0.02	OrthoFinder output from all 47 species
MA_93218g0010	PGP11	ABC transporter B family member 4 OS=Arabidopsis...	0.02	OrthoFinder output from all 47 species
MA_934204g0010	No alias	subfamily ABCB transporter	0.05	OrthoFinder output from all 47 species
Mp2g11920.1	ABCB19,...	subfamily ABCB transporter	0.03	OrthoFinder output from all 47 species
Msp_g13353	PGP13	subfamily ABCB transporter & original description: none	0.03	OrthoFinder output from all 47 species
Msp_g14678	ABCB19,...	subfamily ABCB transporter & original description: none	0.02	OrthoFinder output from all 47 species
Msp_g19766	PGP2	subfamily ABCB transporter & original description: none	0.02	OrthoFinder output from all 47 species
Msp_g31505	PGP11	subfamily ABCB transporter & original description: none	0.04	OrthoFinder output from all 47 species
Nbi_g03862	ABCB19,...	subfamily ABCB transporter & original description: none	0.04	OrthoFinder output from all 47 species
Nbi_g24809	PGP2	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Nbi_g27262	PGP13	subfamily ABCB transporter & original description: none	0.02	OrthoFinder output from all 47 species
Nbi_g32847	PGP21	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Ore_g19207	ABCB19,...	subfamily ABCB transporter & original description: none	0.02	OrthoFinder output from all 47 species
Ore_g29224	ABCB19,...	subfamily ABCB transporter & original description: none	0.02	OrthoFinder output from all 47 species
Ore_g29842	PGP10	subfamily ABCB transporter & original description: none	0.02	OrthoFinder output from all 47 species
Ore_g35743	No alias	subfamily ABCB transporter & original description: none	0.03	OrthoFinder output from all 47 species
Ore_g42482	PGP13	subfamily ABCB transporter & original description: none	0.02	OrthoFinder output from all 47 species
Ore_g43029	PGP2	subfamily ABCB transporter & original description: none	0.06	OrthoFinder output from all 47 species
Pp3c1_7210V3.1	ABCB19,...	ATP binding cassette subfamily B19	0.01	OrthoFinder output from all 47 species
Pp3c21_18190V3.1	ABCB19,...	ATP binding cassette subfamily B19	0.03	OrthoFinder output from all 47 species
Ppi_g07008	ABCB14, ATABCB14, PGP14	subfamily ABCB transporter & original description: none	0.04	OrthoFinder output from all 47 species
Ppi_g17867	PGP11	subfamily ABCB transporter & original description: none	0.03	OrthoFinder output from all 47 species
Ppi_g60298	PGP2	subfamily ABCB transporter & original description: none	0.02	OrthoFinder output from all 47 species
Sacu_v1.1_s0001.g000035	PGP13	subfamily ABCB transporter & original description: CDS=555-4511	0.05	OrthoFinder output from all 47 species
Sacu_v1.1_s0054.g014291	PGP2	subfamily ABCB transporter & original description: CDS=1-4248	0.04	OrthoFinder output from all 47 species
Sacu_v1.1_s0095.g019197	No alias	subfamily ABCB transporter & original description: CDS=1-2220	0.06	OrthoFinder output from all 47 species
Sam_g32980	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Smo230688	ABCB19,...	Solute transport.primary active transport.ABC...	0.04	OrthoFinder output from all 47 species
Solyc03g093650.3.1	Solyc03g093650	subfamily ABCB transporter	0.03	OrthoFinder output from all 47 species
Solyc06g009280.1.1	PGP11, Solyc06g009280	subfamily ABCB transporter	0.03	OrthoFinder output from all 47 species
Solyc08g076720.4.1	PGP2, Solyc08g076720	subfamily ABCB transporter	0.05	OrthoFinder output from all 47 species
Spa_g09413	PGP2	subfamily ABCB transporter & original description: none	0.05	OrthoFinder output from all 47 species
Spa_g26470	ABCB19,...	subfamily ABCB transporter & original description: none	0.03	OrthoFinder output from all 47 species
Spa_g47519	PGP2	subfamily ABCB transporter & original description: none	0.06	OrthoFinder output from all 47 species
Spa_g56665	ABCB19,...	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Tin_g06699	PGP2	subfamily ABCB transporter & original description: none	0.05	OrthoFinder output from all 47 species
Tin_g08541	ABCB19,...	subfamily ABCB transporter & original description: none	0.04	OrthoFinder output from all 47 species
Tin_g31718	PGP2	subfamily ABCB transporter & original description: none	0.04	OrthoFinder output from all 47 species
Tin_g46427	ATPGP4, PGP4, ABCB4, MDR4	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Zm00001e023274_P001	PGP2, Zm00001e023274	subfamily ABCB transporter	0.03	OrthoFinder output from all 47 species
Zm00001e041008_P003	ABCB19,...	auxin efflux transporter (ABCB19). subfamily ABCB transporter	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0005215	transporter activity	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	Interproscan
BP	GO:0006810	transport	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009987	cellular process	None	Extended
MF	GO:0015399	primary active transmembrane transporter activity	None	Extended
MF	GO:0016462	pyrophosphatase activity	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016817	hydrolase activity, acting on acid anhydrides	None	Extended
MF	GO:0016818	hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides	None	Extended
MF	GO:0016887	ATP hydrolysis activity	IEA	Interproscan
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0017111	ribonucleoside triphosphate phosphatase activity	None	Extended
MF	GO:0022804	active transmembrane transporter activity	None	Extended
MF	GO:0022857	transmembrane transporter activity	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0042626	ATPase-coupled transmembrane transporter activity	IEA	Interproscan
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
BP	GO:0051179	localization	None	Extended
BP	GO:0051234	establishment of localization	None	Extended
BP	GO:0055085	transmembrane transport	IEA	Interproscan
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:0140657	ATP-dependent activity	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
MF	GO:0003840	obsolete gamma-glutamyltransferase activity	IEP	HCCA
MF	GO:0003905	alkylbase DNA N-glycosylase activity	IEP	HCCA
MF	GO:0004857	enzyme inhibitor activity	IEP	HCCA
BP	GO:0006281	DNA repair	IEP	HCCA
BP	GO:0006284	base-excision repair	IEP	HCCA
BP	GO:0006518	peptide metabolic process	IEP	HCCA
BP	GO:0006575	cellular modified amino acid metabolic process	IEP	HCCA
BP	GO:0006629	lipid metabolic process	IEP	HCCA
BP	GO:0006631	fatty acid metabolic process	IEP	HCCA
BP	GO:0006633	fatty acid biosynthetic process	IEP	HCCA
BP	GO:0006720	isoprenoid metabolic process	IEP	HCCA
BP	GO:0006721	terpenoid metabolic process	IEP	HCCA
BP	GO:0006749	glutathione metabolic process	IEP	HCCA
BP	GO:0006790	sulfur compound metabolic process	IEP	HCCA
BP	GO:0006974	cellular response to DNA damage stimulus	IEP	HCCA
BP	GO:0008152	metabolic process	IEP	HCCA
BP	GO:0008299	isoprenoid biosynthetic process	IEP	HCCA
BP	GO:0008610	lipid biosynthetic process	IEP	HCCA
MF	GO:0008661	1-deoxy-D-xylulose-5-phosphate synthase activity	IEP	HCCA
MF	GO:0008725	DNA-3-methyladenine glycosylase activity	IEP	HCCA
BP	GO:0009058	biosynthetic process	IEP	HCCA
BP	GO:0016114	terpenoid biosynthetic process	IEP	HCCA
MF	GO:0016744	transketolase or transaldolase activity	IEP	HCCA
MF	GO:0016799	hydrolase activity, hydrolyzing N-glycosyl compounds	IEP	HCCA
MF	GO:0019104	DNA N-glycosylase activity	IEP	HCCA
MF	GO:0030234	enzyme regulator activity	IEP	HCCA
MF	GO:0030599	pectinesterase activity	IEP	HCCA
BP	GO:0033554	cellular response to stress	IEP	HCCA
BP	GO:0043603	amide metabolic process	IEP	HCCA
MF	GO:0043733	DNA-3-methylbase glycosylase activity	IEP	HCCA
BP	GO:0044237	cellular metabolic process	IEP	HCCA
BP	GO:0044249	cellular biosynthetic process	IEP	HCCA
BP	GO:0044255	cellular lipid metabolic process	IEP	HCCA
BP	GO:0044260	cellular macromolecule metabolic process	IEP	HCCA
MF	GO:0051536	iron-sulfur cluster binding	IEP	HCCA
MF	GO:0051540	metal cluster binding	IEP	HCCA
BP	GO:0051716	cellular response to stimulus	IEP	HCCA
BP	GO:0071704	organic substance metabolic process	IEP	HCCA
BP	GO:0072330	monocarboxylic acid biosynthetic process	IEP	HCCA
MF	GO:0098772	molecular function regulator activity	IEP	HCCA
MF	GO:0140097	catalytic activity, acting on DNA	IEP	HCCA
MF	GO:0140678	molecular function inhibitor activity	IEP	HCCA
BP	GO:1901576	organic substance biosynthetic process	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR003439	ABC_transporter-like_ATP-bd	1054	1179
IPR003439	ABC_transporter-like_ATP-bd	418	543

External Links

No external refs found!

AMTR_s00048p00046670 (PGP2,...)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation