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  5. AMTR_s00045p00213010

AMTR_s00045p00213010 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00045.295

No description available


Gene families : OG0001508 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001508_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00045p00213010
Cluster HCCA: Cluster_38

Target Alias Description ECC score Gene Family Method Actions
AT4G15830 No alias ARM repeat superfamily protein 0.12 OrthoFinder output from all 47 species
Als_g32853 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g07933 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0003.g007929 No alias not classified & original description: CDS=232-1104 0.04 OrthoFinder output from all 47 species
GSVIVT01017734001 No alias No description available 0.13 OrthoFinder output from all 47 species
Gb_18598 No alias no hits & (original description: none) 0.09 OrthoFinder output from all 47 species
LOC_Os01g70560.1 LOC_Os01g70560 no hits & (original description: none) 0.11 OrthoFinder output from all 47 species
Ore_g36017 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ore_g44976 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g37509 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Solyc01g080750.3.1 Solyc01g080750 no hits & (original description: none) 0.14 OrthoFinder output from all 47 species
Zm00001e028379_P001 Zm00001e028379 no hits & (original description: none) 0.06 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000247 C-8 sterol isomerase activity IEP HCCA
MF GO:0003774 cytoskeletal motor activity IEP HCCA
MF GO:0003777 microtubule motor activity IEP HCCA
MF GO:0003916 DNA topoisomerase activity IEP HCCA
MF GO:0003918 DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) activity IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
CC GO:0005783 endoplasmic reticulum IEP HCCA
CC GO:0005875 microtubule associated complex IEP HCCA
BP GO:0006066 alcohol metabolic process IEP HCCA
BP GO:0006265 DNA topological change IEP HCCA
BP GO:0006694 steroid biosynthetic process IEP HCCA
BP GO:0006696 ergosterol biosynthetic process IEP HCCA
BP GO:0006996 organelle organization IEP HCCA
BP GO:0007017 microtubule-based process IEP HCCA
BP GO:0007018 microtubule-based movement IEP HCCA
MF GO:0008094 ATP-dependent activity, acting on DNA IEP HCCA
BP GO:0008202 steroid metabolic process IEP HCCA
BP GO:0008204 ergosterol metabolic process IEP HCCA
BP GO:0009132 nucleoside diphosphate metabolic process IEP HCCA
BP GO:0009186 deoxyribonucleoside diphosphate metabolic process IEP HCCA
BP GO:0009987 cellular process IEP HCCA
MF GO:0015035 protein-disulfide reductase activity IEP HCCA
MF GO:0015036 disulfide oxidoreductase activity IEP HCCA
BP GO:0016125 sterol metabolic process IEP HCCA
BP GO:0016126 sterol biosynthetic process IEP HCCA
BP GO:0016128 phytosteroid metabolic process IEP HCCA
BP GO:0016129 phytosteroid biosynthetic process IEP HCCA
MF GO:0016667 oxidoreductase activity, acting on a sulfur group of donors IEP HCCA
MF GO:0016853 isomerase activity IEP HCCA
MF GO:0016860 intramolecular oxidoreductase activity IEP HCCA
MF GO:0016863 intramolecular oxidoreductase activity, transposing C=C bonds IEP HCCA
MF GO:0016881 acid-amino acid ligase activity IEP HCCA
BP GO:0019725 cellular homeostasis IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
BP GO:0042592 homeostatic process IEP HCCA
CC GO:0043227 membrane-bounded organelle IEP HCCA
CC GO:0043231 intracellular membrane-bounded organelle IEP HCCA
BP GO:0044107 cellular alcohol metabolic process IEP HCCA
BP GO:0044108 cellular alcohol biosynthetic process IEP HCCA
BP GO:0044281 small molecule metabolic process IEP HCCA
BP GO:0045454 cell redox homeostasis IEP HCCA
BP GO:0046165 alcohol biosynthetic process IEP HCCA
BP GO:0051276 chromosome organization IEP HCCA
BP GO:0071103 DNA conformation change IEP HCCA
BP GO:0097384 cellular lipid biosynthetic process IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
MF GO:0140657 ATP-dependent activity IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
BP GO:1901615 organic hydroxy compound metabolic process IEP HCCA
BP GO:1901617 organic hydroxy compound biosynthetic process IEP HCCA
BP GO:1902652 secondary alcohol metabolic process IEP HCCA
BP GO:1902653 secondary alcohol biosynthetic process IEP HCCA

No InterPro domains available for this sequence

No external refs found!