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  5. AMTR_s00045p00158000

AMTR_s00045p00158000 (ROC4,...)


Aliases : ROC4, evm_27.TU.AmTr_v1.0_scaffold00045.174

Description : Protein modification.protein folding and quality control.protein folding catalyst activities.Cyclophilin protein folding catalyst


Gene families : OG0000219 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000219_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00045p00158000
Cluster HCCA: Cluster_90

Target Alias Description ECC score Gene Family Method Actions
AT5G13120 ATCYP20-2, CYP20-2 cyclophilin 20-2 0.03 OrthoFinder output from all 47 species
Adi_g039759 No alias EC_5.2 cis-trans-isomerase & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g060434 ATCYP20-2, CYP20-2 EC_5.2 cis-trans-isomerase & original description: none 0.02 OrthoFinder output from all 47 species
Als_g05955 ROC1 EC_5.2 cis-trans-isomerase & original description: none 0.02 OrthoFinder output from all 47 species
Als_g12365 No alias EC_5.2 cis-trans-isomerase & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene34444.t1 ATCYP20-2,... EC_5.2 cis-trans-isomerase & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene45982.t1 ROC3, Aspi01Gene45982 EC_5.2 cis-trans-isomerase & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0395.g067869 ATCYP20-2, CYP20-2 EC_5.2 cis-trans-isomerase & original description: CDS=102-785 0.04 OrthoFinder output from all 47 species
Cba_g03055 ATCYP20-2, CYP20-2 EC_5.2 cis-trans-isomerase & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g12958 ATCYP20-2, CYP20-2 EC_5.2 cis-trans-isomerase & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.1Z195800.1 Ceric.1Z195800 EC_5.2 cis-trans-isomerase & original description:... 0.04 OrthoFinder output from all 47 species
Ceric.32G051100.1 ATCYP20-2,... EC_5.2 cis-trans-isomerase & original description:... 0.05 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000402.47 ROC4 Protein modification.protein folding and quality... 0.01 OrthoFinder output from all 47 species
Cre06.g284900 CYP5, ATCYP5, CYP19-4 Protein modification.protein folding and quality... 0.02 OrthoFinder output from all 47 species
Cre13.g588100 ROC2 Protein modification.protein folding and quality... 0.03 OrthoFinder output from all 47 species
Dac_g01921 ROC2 EC_5.2 cis-trans-isomerase & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g02039 ATCYP20-2, CYP20-2 EC_5.2 cis-trans-isomerase & original description: none 0.03 OrthoFinder output from all 47 species
LOC_Os01g18210.1 ROC4, LOC_Os01g18210 protein folding catalyst 0.03 OrthoFinder output from all 47 species
Len_g11459 ATCYP20-2, CYP20-2 EC_5.2 cis-trans-isomerase & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g02684 ATCYP20-2, CYP20-2 EC_5.2 cis-trans-isomerase & original description: none 0.03 OrthoFinder output from all 47 species
Mp7g15930.1 ATCYP20-2, CYP20-2 component PnsL5 of NDH lumen subcomplex L. protein... 0.04 OrthoFinder output from all 47 species
Nbi_g00741 No alias EC_5.2 cis-trans-isomerase & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g11717 CYP5, ATCYP5, CYP19-4 EC_5.2 cis-trans-isomerase & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g12856 ATCYP20-2, CYP20-2 EC_5.2 cis-trans-isomerase & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0011.g005017 ATCYP20-2, CYP20-2 EC_5.2 cis-trans-isomerase & original description: CDS=32-877 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0046.g013401 ROC7 EC_5.2 cis-trans-isomerase & original description: CDS=89-709 0.03 OrthoFinder output from all 47 species
Solyc01g009990.3.1 ATCYP20-2,... component PnsL5 of NDH lumen subcomplex L. protein... 0.03 OrthoFinder output from all 47 species
Spa_g10055 ATCYP20-2, CYP20-2 EC_5.2 cis-trans-isomerase & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g29336 ATCYP20-2, CYP20-2 EC_5.2 cis-trans-isomerase & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g55953 ATCYP20-2, CYP20-2 EC_5.2 cis-trans-isomerase & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e027678_P001 ATCYP20-2,... component PnsL5 of NDH lumen subcomplex L. protein... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEA Interproscan
BP GO:0006457 protein folding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003864 3-methyl-2-oxobutanoate hydroxymethyltransferase activity IEP HCCA
MF GO:0003913 DNA photolyase activity IEP HCCA
MF GO:0004852 uroporphyrinogen-III synthase activity IEP HCCA
BP GO:0006082 organic acid metabolic process IEP HCCA
BP GO:0006281 DNA repair IEP HCCA
BP GO:0006575 cellular modified amino acid metabolic process IEP HCCA
BP GO:0006631 fatty acid metabolic process IEP HCCA
BP GO:0006633 fatty acid biosynthetic process IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0006766 vitamin metabolic process IEP HCCA
BP GO:0006767 water-soluble vitamin metabolic process IEP HCCA
BP GO:0006974 cellular response to DNA damage stimulus IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
BP GO:0009058 biosynthetic process IEP HCCA
BP GO:0009110 vitamin biosynthetic process IEP HCCA
BP GO:0015939 pantothenate metabolic process IEP HCCA
BP GO:0015940 pantothenate biosynthetic process IEP HCCA
BP GO:0016053 organic acid biosynthetic process IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016742 hydroxymethyl-, formyl- and related transferase activity IEP HCCA
MF GO:0016746 acyltransferase activity IEP HCCA
MF GO:0016790 thiolester hydrolase activity IEP HCCA
MF GO:0016829 lyase activity IEP HCCA
MF GO:0016830 carbon-carbon lyase activity IEP HCCA
MF GO:0016835 carbon-oxygen lyase activity IEP HCCA
MF GO:0016836 hydro-lyase activity IEP HCCA
MF GO:0016866 intramolecular transferase activity IEP HCCA
MF GO:0016868 intramolecular transferase activity, phosphotransferases IEP HCCA
BP GO:0019725 cellular homeostasis IEP HCCA
BP GO:0019752 carboxylic acid metabolic process IEP HCCA
BP GO:0032787 monocarboxylic acid metabolic process IEP HCCA
BP GO:0033013 tetrapyrrole metabolic process IEP HCCA
BP GO:0033014 tetrapyrrole biosynthetic process IEP HCCA
BP GO:0033554 cellular response to stress IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0042364 water-soluble vitamin biosynthetic process IEP HCCA
BP GO:0042398 cellular modified amino acid biosynthetic process IEP HCCA
BP GO:0042592 homeostatic process IEP HCCA
BP GO:0043436 oxoacid metabolic process IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044249 cellular biosynthetic process IEP HCCA
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP HCCA
BP GO:0044281 small molecule metabolic process IEP HCCA
BP GO:0044283 small molecule biosynthetic process IEP HCCA
BP GO:0045454 cell redox homeostasis IEP HCCA
BP GO:0046394 carboxylic acid biosynthetic process IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
MF GO:0050660 flavin adenine dinucleotide binding IEP HCCA
BP GO:0051716 cellular response to stimulus IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
BP GO:0072330 monocarboxylic acid biosynthetic process IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
BP GO:1901566 organonitrogen compound biosynthetic process IEP HCCA
BP GO:1901576 organic substance biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR002130 Cyclophilin-type_PPIase_dom 94 249
No external refs found!