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  5. AMTR_s00045p00134040

AMTR_s00045p00134040 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00045.133

No description available


Gene families : OG0001805 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001805_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00045p00134040

Target Alias Description ECC score Gene Family Method Actions
AT3G17580 No alias unknown protein; BEST Arabidopsis thaliana protein match... 0.03 OrthoFinder output from all 47 species
Adi_g027067 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene67442.t1 Aspi01Gene67442 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0038.g026292 No alias not classified & original description: CDS=427-624 0.02 OrthoFinder output from all 47 species
Cba_g77215 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.17G056300.1 Ceric.17G056300 not classified & original description: pacid=50618383... 0.03 OrthoFinder output from all 47 species
Ceric.31G019500.1 Ceric.31G019500 not classified & original description: pacid=50573563... 0.03 OrthoFinder output from all 47 species
Ceric.37G002200.1 Ceric.37G002200 not classified & original description: pacid=50616623... 0.03 OrthoFinder output from all 47 species
Ceric.37G008300.1 Ceric.37G008300 not classified & original description: pacid=50616145... 0.03 OrthoFinder output from all 47 species
Dac_g06874 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g09634 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
GSVIVT01021842001 No alias No description available 0.02 OrthoFinder output from all 47 species
Gb_24695 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
LOC_Os05g04680.1 LOC_Os05g04680 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Sam_g20924 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Solyc06g068620.3.1 Solyc06g068620 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Zm00001e011985_P001 Zm00001e011985 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
BP GO:0009116 nucleoside metabolic process IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
MF GO:0042802 identical protein binding IEP HCCA
BP GO:0043086 negative regulation of catalytic activity IEP HCCA
BP GO:0044092 negative regulation of molecular function IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050790 regulation of catalytic activity IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
BP GO:0065009 regulation of molecular function IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
MF GO:0140110 transcription regulator activity IEP HCCA
BP GO:1901657 glycosyl compound metabolic process IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA

No InterPro domains available for this sequence

No external refs found!