1. Home
  2. Species
  3. Amborella trichopoda
  4. Sequence
  5. AMTR_s00045p00124970

AMTR_s00045p00124970 (FUM1,...)


Aliases : FUM1, evm_27.TU.AmTr_v1.0_scaffold00045.123

Description : Cellular respiration.tricarboxylic acid cycle.fumarase


Gene families : OG0004044 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004044_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00045p00124970

Target Alias Description ECC score Gene Family Method Actions
Cre01.g020223 FUM1 Cellular respiration.tricarboxylic acid cycle.fumarase 0.01 OrthoFinder output from all 47 species
MA_1659g0010 FUM1 fumarase 0.04 OrthoFinder output from all 47 species
Pir_g65520 FUM1 EC_4.2 carbon-oxygen lyase & original description: none 0.02 OrthoFinder output from all 47 species
Pp3c23_19500V3.1 FUM1, Pp3c23_19500 FUMARASE 2 0.01 OrthoFinder output from all 47 species
Spa_g06276 FUM1 EC_4.2 carbon-oxygen lyase & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0006099 tricarboxylic acid cycle IEA Interproscan
MF GO:0016829 lyase activity IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004421 hydroxymethylglutaryl-CoA synthase activity IEP HCCA
BP GO:0006720 isoprenoid metabolic process IEP HCCA
BP GO:0008299 isoprenoid biosynthetic process IEP HCCA
BP GO:0008610 lipid biosynthetic process IEP HCCA
MF GO:0016746 acyltransferase activity IEP HCCA
BP GO:0044255 cellular lipid metabolic process IEP HCCA
MF GO:0046912 acyltransferase activity, acyl groups converted into alkyl on transfer IEP HCCA
InterPro domains Description Start Stop
IPR018951 Fumarase_C_C 438 492
IPR022761 Fumarate_lyase_N 43 372
No external refs found!