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  5. AMTR_s00045p00090540

AMTR_s00045p00090540 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00045.82

Description : RNA processing.RNA modification.tRNA N6-threonylcarbamoylation.KEOPS/EKC complex.KAE1 component


Gene families : OG0006131 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0006131_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00045p00090540

Target Alias Description ECC score Gene Family Method Actions
Aop_g00575 No alias component *(KAE1) of tRNA N6-threonylcarbamoylation... 0.02 OrthoFinder output from all 47 species
Azfi_s0099.g044076 No alias component *(KAE1) of tRNA N6-threonylcarbamoylation... 0.03 OrthoFinder output from all 47 species
Cba_g08500 No alias component *(KAE1) of tRNA N6-threonylcarbamoylation... 0.03 OrthoFinder output from all 47 species
Ehy_g02225 No alias component *(KAE1) of tRNA N6-threonylcarbamoylation... 0.04 OrthoFinder output from all 47 species
LOC_Os05g10630.1 LOC_Os05g10630 component KAE1 of tRNA N6-threonylcarbamoylation... 0.03 OrthoFinder output from all 47 species
Pir_g09419 No alias component *(KAE1) of tRNA N6-threonylcarbamoylation... 0.03 OrthoFinder output from all 47 species
Pnu_g31453 No alias component *(KAE1) of tRNA N6-threonylcarbamoylation... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0004055 argininosuccinate synthase activity IEP HCCA
MF GO:0004222 metalloendopeptidase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
BP GO:0006457 protein folding IEP HCCA
BP GO:0006525 arginine metabolic process IEP HCCA
BP GO:0006526 arginine biosynthetic process IEP HCCA
BP GO:0007155 cell adhesion IEP HCCA
BP GO:0008150 biological_process IEP HCCA
MF GO:0008237 metallopeptidase activity IEP HCCA
MF GO:0008270 zinc ion binding IEP HCCA
BP GO:0008652 amino acid biosynthetic process IEP HCCA
BP GO:0009064 glutamine family amino acid metabolic process IEP HCCA
BP GO:0009084 glutamine family amino acid biosynthetic process IEP HCCA
BP GO:0009987 cellular process IEP HCCA
BP GO:0016053 organic acid biosynthetic process IEP HCCA
MF GO:0016879 ligase activity, forming carbon-nitrogen bonds IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043169 cation binding IEP HCCA
BP GO:0046394 carboxylic acid biosynthetic process IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
MF GO:0051082 unfolded protein binding IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
BP GO:1901605 alpha-amino acid metabolic process IEP HCCA
BP GO:1901607 alpha-amino acid biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR000905 Gcp-like_dom 26 301
No external refs found!