1. Home
  2. Species
  3. Amborella trichopoda
  4. Sequence
  5. AMTR_s00044p00174560

AMTR_s00044p00174560 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00044.192

Description : Enzyme classification.EC_3 hydrolases.EC_3.2 glycosylase


Gene families : OG0000696 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000696_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00044p00174560

Target Alias Description ECC score Gene Family Method Actions
AT4G19720 No alias Glycosyl hydrolase family protein with chitinase insertion domain 0.02 OrthoFinder output from all 47 species
Adi_g007216 No alias EC_3.2 glycosylase & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g077591 No alias EC_3.2 glycosylase & original description: none 0.05 OrthoFinder output from all 47 species
Aev_g11597 No alias EC_3.2 glycosylase & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g33209 No alias EC_3.2 glycosylase & original description: none 0.03 OrthoFinder output from all 47 species
Als_g62122 No alias EC_3.2 glycosylase & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene64398.t1 Aspi01Gene64398 EC_3.2 glycosylase & original description: none 0.02 OrthoFinder output from all 47 species
Cre05.g233304 No alias Agglutinin isolectin 1 OS=Triticum aestivum 0.01 OrthoFinder output from all 47 species
Dac_g15731 No alias EC_3.2 glycosylase & original description: none 0.05 OrthoFinder output from all 47 species
Dde_g47090 No alias EC_3.2 glycosylase & original description: none 0.02 OrthoFinder output from all 47 species
Gb_00909 No alias Class V chitinase OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Gb_00910 No alias Class V chitinase OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
Gb_10730 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Len_g47633 No alias EC_3.2 glycosylase & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g12849 No alias EC_3.2 glycosylase & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g24463 No alias EC_3.2 glycosylase & original description: none 0.03 OrthoFinder output from all 47 species
Smo410072 No alias Class V chitinase OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
Smo55473 No alias Class V chitinase OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Tin_g40078 No alias EC_3.2 glycosylase & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEA Interproscan
BP GO:0005975 carbohydrate metabolic process IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR001223 Glyco_hydro18_cat 31 359
No external refs found!