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  5. AMTR_s00044p00085200

AMTR_s00044p00085200 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00044.57

Description : Probable plastid-lipid-associated protein 12, chloroplastic OS=Arabidopsis thaliana


Gene families : OG0005584 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005584_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00044p00085200

Target Alias Description ECC score Gene Family Method Actions
AT1G51110 No alias Plastid-lipid associated protein PAP / fibrillin family protein 0.08 OrthoFinder output from all 47 species
Aev_g01024 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g06866 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0315.g064307 No alias not classified & original description: CDS=129-1313 0.05 OrthoFinder output from all 47 species
Cba_g29671 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g04559 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ehy_g19599 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
GSVIVT01025367001 No alias Probable plastid-lipid-associated protein 12,... 0.07 OrthoFinder output from all 47 species
Gb_09730 No alias Probable plastid-lipid-associated protein 12,... 0.02 OrthoFinder output from all 47 species
LOC_Os07g28790.1 LOC_Os07g28790 Probable plastid-lipid-associated protein 12,... 0.05 OrthoFinder output from all 47 species
Len_g13850 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g09919 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
MA_5934993g0010 No alias Probable plastid-lipid-associated protein 12,... 0.03 OrthoFinder output from all 47 species
Nbi_g26346 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g45226 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g04696 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g31225 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Solyc01g006330.4.1 Solyc01g006330 Probable plastid-lipid-associated protein 12,... 0.05 OrthoFinder output from all 47 species
Zm00001e034859_P002 Zm00001e034859 Probable plastid-lipid-associated protein 12,... 0.07 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005198 structural molecule activity IEA Interproscan
CC GO:0009507 chloroplast IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0006457 protein folding IEP HCCA
BP GO:0006810 transport IEP HCCA
BP GO:0008104 protein localization IEP HCCA
BP GO:0015031 protein transport IEP HCCA
CC GO:0016020 membrane IEP HCCA
BP GO:0030001 metal ion transport IEP HCCA
BP GO:0033036 macromolecule localization IEP HCCA
BP GO:0045184 establishment of protein localization IEP HCCA
MF GO:0046873 metal ion transmembrane transporter activity IEP HCCA
BP GO:0051179 localization IEP HCCA
BP GO:0051234 establishment of localization IEP HCCA
BP GO:0070727 cellular macromolecule localization IEP HCCA
BP GO:0071705 nitrogen compound transport IEP HCCA
InterPro domains Description Start Stop
IPR006843 PAP/fibrillin_dom 52 228
No external refs found!