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  5. AMTR_s00043p00170080

AMTR_s00043p00170080 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00043.39

No description available


Gene families : OG0007147 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0007147_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00043p00170080

Target Alias Description ECC score Gene Family Method Actions
Dde_g13090 No alias regulatory component *(FYVE4) of ESCRT-III complex &... 0.02 OrthoFinder output from all 47 species
Ehy_g24784 No alias regulatory component *(FYVE4) of ESCRT-III complex &... 0.03 OrthoFinder output from all 47 species
Gb_13734 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Pnu_g18831 No alias regulatory component *(FYVE4) of ESCRT-III complex &... 0.02 OrthoFinder output from all 47 species
Tin_g07955 No alias regulatory component *(FYVE4) of ESCRT-III complex &... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0046872 metal ion binding IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000786 nucleosome IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
MF GO:0004842 ubiquitin-protein transferase activity IEP HCCA
MF GO:0005515 protein binding IEP HCCA
CC GO:0005634 nucleus IEP HCCA
BP GO:0006260 DNA replication IEP HCCA
BP GO:0006325 chromatin organization IEP HCCA
BP GO:0006334 nucleosome assembly IEP HCCA
BP GO:0006338 chromatin remodeling IEP HCCA
MF GO:0019787 ubiquitin-like protein transferase activity IEP HCCA
BP GO:0022607 cellular component assembly IEP HCCA
CC GO:0032993 protein-DNA complex IEP HCCA
BP GO:0034728 nucleosome organization IEP HCCA
CC GO:0043226 organelle IEP HCCA
CC GO:0043227 membrane-bounded organelle IEP HCCA
CC GO:0043229 intracellular organelle IEP HCCA
CC GO:0043231 intracellular membrane-bounded organelle IEP HCCA
BP GO:0043933 protein-containing complex organization IEP HCCA
CC GO:0044815 DNA packaging complex IEP HCCA
BP GO:0065003 protein-containing complex assembly IEP HCCA
BP GO:0065004 protein-DNA complex assembly IEP HCCA
BP GO:0071824 protein-DNA complex subunit organization IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
InterPro domains Description Start Stop
IPR000306 Znf_FYVE 17 75
No external refs found!