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  5. AMTR_s00043p00044990

AMTR_s00043p00044990 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00043.7

Description : RNA biosynthesis.transcriptional activation.PHD finger transcription factor


Gene families : OG0003400 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003400_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00043p00044990
Cluster HCCA: Cluster_22

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00024p00102300 MS1,... RNA biosynthesis.transcriptional activation.PHD finger... 0.01 OrthoFinder output from all 47 species
AMTR_s00043p00045130 MMD1,... RNA biosynthesis.transcriptional activation.PHD finger... 0.05 OrthoFinder output from all 47 species
LOC_Os03g50780.1 MMD1, LOC_Os03g50780 MMD1/DUET meiotic recombination regulating protein. PHD... 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0105.g020189 MMD1 transcriptional regulator *(MS1) & original description:... 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0127.g021795 MS1 PHD finger transcription factor & original description:... 0.05 OrthoFinder output from all 47 species
Spa_g50133 MMD1 transcriptional regulator *(MS1) & original description: none 0.01 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

No InterPro domains available for this sequence

No external refs found!