Heatmap: Cluster_22 (HCCA)

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Egg apparatus cell (small)
Egg apparatus cell (medium)
Egg apparatus cell (large)
Ovary
Uninuclear microspore
Generative cell
Pollen
Sperm
Pollen tube (bicellular)
Pollen tube (tricellular)
Flower (bud, female)
Flower (bud, male)
Flower (female)
Flower (male)
Flower (tepals)
Fruit (female)
Apical meristem
Shoot (female)
Shoot (male)
Leaf (male)
Leaves
Root (male)
AMTR_s00001p00252030 (evm_27.TU.AmTr_v1.0_scaffold00001.322)
- - - -7.29 2.57 - - -6.05 - - -5.76 3.99 - - -3.41 - - - - - - -
AMTR_s00001p00271740 (evm_27.TU.AmTr_v1.0_scaffold00001.496)
- - - - 2.85 - - - -1.13 - - 3.84 - - - - - - - - - -
AMTR_s00002p00237460 (evm_27.TU.AmTr_v1.0_scaffold00002.285)
- - - - 0.24 - -1.56 0.22 0.83 0.25 2.08 3.54 -5.35 -3.3 -1.46 - - - - - - -
AMTR_s00002p00237570 (evm_27.TU.AmTr_v1.0_scaffold00002.286)
- - - - -2.45 - - - - - 1.93 4.14 - - -3.42 - - - - - - -2.17
AMTR_s00002p00238600 (evm_27.TU.AmTr_v1.0_scaffold00002.288)
- - - - 0.49 - -0.88 - 0.48 0.88 0.15 3.94 - - -1.31 - - - - - - -
- - - - -0.21 - - - - - 1.84 4.1 - -3.55 -1.73 - - - - - - -
AMTR_s00004p00090020 (evm_27.TU.AmTr_v1.0_scaffold00004.72)
- - - - 1.91 - - - - - - 4.07 - - 0.57 - - - - - - -
AMTR_s00005p00242130 (evm_27.TU.AmTr_v1.0_scaffold00005.133)
- - - - -3.19 - -6.79 - -6.61 -6.46 1.16 4.26 -6.28 - -3.16 - -4.15 -2.2 - - - -3.47
AMTR_s00005p00243050 (evm_27.TU.AmTr_v1.0_scaffold00005.135)
- - - - - - -3.62 - -3.98 -4.1 0.82 4.31 -5.56 -5.8 -2.95 - - - - - - -3.6
AMTR_s00005p00243060 (evm_27.TU.AmTr_v1.0_scaffold00005.136)
- - - - - - -1.77 - -4.14 -4.08 1.76 4.16 -2.48 - -3.13 - - - - -3.62 - -
AMTR_s00005p00250290 (evm_27.TU.AmTr_v1.0_scaffold00005.155)
0.5 -1.25 0.37 -2.34 -0.65 - -3.15 - -3.48 -3.95 1.31 3.43 -0.33 -1.27 -2.12 -0.46 -2.03 - 0.43 -1.66 - -1.07
AMTR_s00005p00250300 (evm_27.TU.AmTr_v1.0_scaffold00005.156)
- - - - -1.17 0.19 -3.38 - 0.02 -0.8 1.65 3.56 -5.33 -2.47 -2.18 -1.11 -5.48 0.13 0.28 -1.29 -3.48 -3.82
AMTR_s00005p00264830 (evm_27.TU.AmTr_v1.0_scaffold00005.219)
-1.08 - -2.12 - -1.07 - -2.08 - -0.87 -1.16 1.44 3.9 -4.85 -5.73 -4.55 -1.71 -3.12 0.25 -2.5 - - -4.84
AMTR_s00008p00257470 (evm_27.TU.AmTr_v1.0_scaffold00008.203)
- - - - -0.35 - - - - - 1.43 4.21 - - - - - - - - - -
AMTR_s00009p00234850 (evm_27.TU.AmTr_v1.0_scaffold00009.191)
- - - - 2.54 - - - -0.86 - - 3.97 - - - - - - - - - -
AMTR_s00010p00234150 (evm_27.TU.AmTr_v1.0_scaffold00010.274)
- - - - 2.62 - - - - - - 3.94 - -0.94 - - - - - - - -
AMTR_s00012p00239780 (evm_27.TU.AmTr_v1.0_scaffold00012.210)
- - - - 2.15 - -1.63 - -0.67 -1.67 - 3.96 -3.73 -1.39 -1.64 - - - - - - -
AMTR_s00012p00258210 (evm_27.TU.AmTr_v1.0_scaffold00012.306)
- - - - -1.03 - - - 1.75 -1.11 - 4.14 - - -3.22 - - - - - - -
AMTR_s00012p00265590 (evm_27.TU.AmTr_v1.0_scaffold00012.373)
- - - - 1.37 - - - -0.25 -0.29 0.76 3.95 -3.09 - -1.19 - - - - - - -
AMTR_s00013p00256950 (evm_27.TU.AmTr_v1.0_scaffold00013.252)
- - - - 1.09 - 1.01 - -2.67 -0.91 1.07 3.85 - - -0.65 - - - - - - -
AMTR_s00016p00168680 (evm_27.TU.AmTr_v1.0_scaffold00016.127)
- - - - 0.04 - -0.11 - 1.17 1.86 -1.08 3.7 - -1.44 -2.39 - - - - - - -2.96
AMTR_s00016p00220500 (evm_27.TU.AmTr_v1.0_scaffold00016.201)
- - - - 2.96 - - - -2.09 - - 3.63 - - - - - - - - - 0.66
AMTR_s00017p00134300 (evm_27.TU.AmTr_v1.0_scaffold00017.56)
0.51 0.57 0.87 - 2.34 - -1.25 -4.85 -2.14 -2.09 -2.42 3.08 -2.53 -2.43 0.29 -2.01 -2.41 - -2.4 -2.87 -2.79 -3.03
- - - - 1.17 - - - - - - 3.97 - - - - - - - - 2.03 -
AMTR_s00022p00186920 (evm_27.TU.AmTr_v1.0_scaffold00022.201)
- 1.68 - -2.73 -1.0 - - - - - 2.05 3.58 -1.12 -5.28 -5.83 - -2.04 -1.38 -2.36 -3.8 -3.12 -0.95
AMTR_s00024p00102840 (evm_27.TU.AmTr_v1.0_scaffold00024.51)
- - - -2.36 1.04 - - - -0.49 -1.74 - 3.87 -3.23 -2.3 0.94 - -0.92 - - - - 0.44
AMTR_s00024p00117940 (evm_27.TU.AmTr_v1.0_scaffold00024.66)
1.41 0.46 - -3.12 1.6 - -4.23 - -2.97 -4.62 0.17 3.31 0.49 -2.61 -1.01 - -0.86 - - -1.62 -1.69 -1.84
AMTR_s00024p00118050 (evm_27.TU.AmTr_v1.0_scaffold00024.67)
- - - -5.04 -2.83 - -5.17 - -5.68 - 1.36 3.84 -0.72 -4.21 -2.48 - 0.51 -1.4 -3.56 0.65 - -0.67
AMTR_s00024p00118410 (evm_27.TU.AmTr_v1.0_scaffold00024.68)
- - - - -1.68 - -7.82 - -7.84 -5.53 2.41 3.99 -7.89 -8.12 -2.19 -3.93 -5.5 - -4.53 - - -4.68
AMTR_s00025p00201810 (evm_27.TU.AmTr_v1.0_scaffold00025.256)
- - - - 1.95 - - - - - - 4.06 -2.12 - -0.84 - - - - - - -0.59
AMTR_s00032p00171590 (evm_27.TU.AmTr_v1.0_scaffold00032.144)
- - - -1.7 -0.45 - -1.19 - -0.45 -0.78 0.84 3.99 -1.28 -2.96 -1.69 -2.98 -1.99 - -4.77 -3.45 -3.76 -2.75
AMTR_s00036p00092000 (evm_27.TU.AmTr_v1.0_scaffold00036.34)
- - - - 0.64 - -0.75 1.02 -0.99 -0.61 0.95 3.65 -5.25 -4.31 0.26 - -2.42 -0.63 - - - -4.79
AMTR_s00036p00093190 (evm_27.TU.AmTr_v1.0_scaffold00036.35)
- - - - 0.15 - - - - -4.03 0.38 4.28 - - - - - - - - - -3.18
AMTR_s00036p00131280 (evm_27.TU.AmTr_v1.0_scaffold00036.57)
- - - - 0.06 -1.97 0.71 - 0.0 0.34 1.44 3.57 -3.79 -2.09 0.81 - - - -3.27 - - -4.76
AMTR_s00038p00206660 (evm_27.TU.AmTr_v1.0_scaffold00038.159)
- - - - 2.29 - - - - - - 3.89 -5.77 -3.61 0.29 - - - -2.33 -0.84 - -1.96
AMTR_s00039p00063960 (evm_27.TU.AmTr_v1.0_scaffold00039.25)
- - - - 2.47 - - - - - - 4.04 - - - - - - - - - -
AMTR_s00039p00222250 (evm_27.TU.AmTr_v1.0_scaffold00039.194)
- - - - 1.67 - - - -1.55 -1.29 - 3.85 -2.06 -2.06 - - - - 1.5 - - -1.52
AMTR_s00040p00095710 (evm_27.TU.AmTr_v1.0_scaffold00040.57)
- - - - -0.99 - - - - -3.62 0.63 4.15 0.05 -0.82 -4.22 - - - - -1.59 - -2.78
AMTR_s00040p00095760 (evm_27.TU.AmTr_v1.0_scaffold00040.58)
- - - - 1.94 - -3.44 - 1.24 -0.72 - 3.61 -0.65 -0.58 -0.03 - - - - - - -0.76
AMTR_s00040p00218960 (evm_27.TU.AmTr_v1.0_scaffold00040.237)
- - - - -0.74 - - - 0.92 -0.63 2.02 3.8 - -0.14 - - - - - - - -
AMTR_s00040p00219170 (evm_27.TU.AmTr_v1.0_scaffold00040.240)
- - - - 1.68 - -1.51 - 1.45 0.65 1.67 3.45 - - - - - - - - - -
- - - - -1.22 - -1.97 -2.45 -0.33 -0.74 1.25 3.89 -3.6 -1.99 -1.17 -2.32 -1.57 - -3.11 - -2.1 -0.2
-3.72 - -0.89 -3.0 2.54 - -1.37 -1.11 0.31 -0.55 -0.65 3.32 -4.75 -2.23 0.69 - - - -3.03 - - -5.21
AMTR_s00040p00220090 (evm_27.TU.AmTr_v1.0_scaffold00040.245)
- - - - -0.29 - -4.21 - 1.41 0.51 0.95 3.89 -3.79 -3.29 -2.95 - - - - - - -
AMTR_s00040p00220690 (evm_27.TU.AmTr_v1.0_scaffold00040.249)
- - - - -0.8 - -2.74 - -2.15 -2.3 1.1 4.17 -4.41 -3.25 -2.27 - -1.32 - - - - -
- - - - -0.72 - - - -2.38 -3.58 0.7 4.0 -2.21 -2.53 -2.95 -0.89 0.37 - - -2.55 -0.67 -1.41
AMTR_s00040p00221190 (evm_27.TU.AmTr_v1.0_scaffold00040.252)
- - - - 1.92 - -3.49 - -2.16 -1.79 0.89 3.89 - - -0.17 - - - - - - -
AMTR_s00040p00221850 (evm_27.TU.AmTr_v1.0_scaffold00040.254)
- - - - -3.95 - -0.52 - -0.96 -0.71 1.46 4.01 -4.23 -2.06 -2.73 -2.05 - - -2.84 -3.86 -1.83 -2.89
AMTR_s00040p00221930 (evm_27.TU.AmTr_v1.0_scaffold00040.255)
- - - - -2.05 - -3.69 - -3.39 -2.56 1.9 4.08 -5.81 -6.33 -3.37 -1.75 -2.97 - -4.36 -3.04 - -4.05
AMTR_s00043p00044990 (evm_27.TU.AmTr_v1.0_scaffold00043.7)
- - - - -3.28 - 0.37 - 0.02 -0.31 0.87 3.94 - 0.32 -2.33 - - - - - - -2.58
AMTR_s00045p00158480 (evm_27.TU.AmTr_v1.0_scaffold00045.175)
- - - - 1.77 - -0.77 - -0.96 -0.31 -4.62 3.94 - -3.75 0.28 - -5.02 - - - - -
AMTR_s00048p00094230 (evm_27.TU.AmTr_v1.0_scaffold00048.46)
0.67 - - - 2.46 - -0.9 - -2.98 -1.86 - 3.53 -3.1 -2.7 0.96 - - - - - - -2.22
AMTR_s00051p00018530 (evm_27.TU.AmTr_v1.0_scaffold00051.3)
- - - - - - - - -0.52 -0.54 2.22 4.0 - - - - - - - - - -
AMTR_s00051p00018730 (evm_27.TU.AmTr_v1.0_scaffold00051.4)
- - - - -0.0 - -1.12 0.85 1.21 0.93 -0.49 3.51 - -0.79 -1.6 -0.23 -0.72 - - -3.61 - -
AMTR_s00054p00164290 (evm_27.TU.AmTr_v1.0_scaffold00054.60)
- - - -7.46 1.73 - -8.94 -7.58 -6.83 -6.69 - 4.16 -9.89 -10.16 -0.28 - - - - -10.49 - -8.35
AMTR_s00064p00061350 (evm_27.TU.AmTr_v1.0_scaffold00064.16)
- - - - -3.74 - - - - - 2.37 3.91 -3.85 - -3.54 - - - - - - 0.62
AMTR_s00065p00065020 (evm_27.TU.AmTr_v1.0_scaffold00065.33)
1.97 - - - 1.63 - -7.63 - -5.24 -5.95 0.69 3.5 -2.62 - -0.8 - -0.56 -2.01 -3.99 - - -1.89
AMTR_s00065p00098360 (evm_27.TU.AmTr_v1.0_scaffold00065.53)
- - - - 1.48 - -10.39 -7.29 - -10.17 -0.36 3.66 -1.07 0.8 0.05 -5.24 -3.45 -4.29 -3.03 -1.13 -2.44 0.67
AMTR_s00065p00166550 (evm_27.TU.AmTr_v1.0_scaffold00065.131)
- - - - 0.8 - 0.87 -2.08 1.49 1.1 -1.19 3.37 -5.15 -1.85 0.64 -2.72 -4.13 - - - -2.5 -2.45
AMTR_s00071p00136960 (evm_27.TU.AmTr_v1.0_scaffold00071.122)
- - - - -0.5 - - - - - - 4.23 - - 1.3 - - - - - - -
AMTR_s00072p00087060 (evm_27.TU.AmTr_v1.0_scaffold00072.38)
- - - - - - - - -1.41 -2.23 1.44 4.22 - - - - - - - - - -
AMTR_s00072p00111150 (evm_27.TU.AmTr_v1.0_scaffold00072.55)
- - - - -1.74 - -7.5 - -5.58 - 1.57 4.21 -6.91 -4.93 -3.03 - - - - - - -
- - - - 2.03 - - - -2.91 - - 3.58 -1.32 -1.22 1.31 - - - - 0.49 - 0.12
AMTR_s00090p00118750 (evm_27.TU.AmTr_v1.0_scaffold00090.56)
- - - - -4.31 - -3.15 - -2.37 -2.36 1.0 4.24 - -7.01 -1.77 - -3.77 -3.4 - - - -3.24
AMTR_s00091p00036740 (evm_27.TU.AmTr_v1.0_scaffold00091.5)
- - - - 0.98 - 0.29 - 0.06 0.46 - 3.95 - -0.1 - - - - - - - -
AMTR_s00104p00037440 (evm_27.TU.AmTr_v1.0_scaffold00104.3)
- - - - 0.96 - -1.69 - -1.48 -2.32 - 4.02 1.38 - -1.32 - - - - - - -
AMTR_s00109p00108980 (evm_27.TU.AmTr_v1.0_scaffold00109.103)
- - - - - - - - - - - 4.25 - - 1.56 - - - - - - -
AMTR_s00117p00042960 (evm_27.TU.AmTr_v1.0_scaffold00117.9)
- - - - 0.03 - -1.27 - -0.58 0.23 1.67 3.45 -0.99 0.52 -0.74 - - - - -0.78 - 0.56
AMTR_s00120p00017180 (evm_27.TU.AmTr_v1.0_scaffold00120.2)
- - - - -3.33 - - - - - 1.82 3.95 -2.07 -5.36 -3.04 0.12 -0.33 -1.1 - -4.28 - -3.59
- - - -2.61 0.96 - -3.13 - - -4.19 0.6 4.14 - - -0.85 - - - - - - -
- - - - -1.66 - -4.79 - -4.01 -4.17 1.63 4.08 -1.76 -4.51 -1.88 - -2.79 - -3.01 -1.51 - -1.71
AMTR_s00140p00019120 (evm_27.TU.AmTr_v1.0_scaffold00140.2)
- - -3.0 - -3.39 - - - -5.73 -5.44 2.03 3.8 -1.31 -1.82 -2.66 - -0.36 -2.68 -1.75 -1.19 -0.03 -2.0
AMTR_s00140p00114520 (evm_27.TU.AmTr_v1.0_scaffold00140.57)
- - - - 1.36 - - - -5.74 -5.58 1.64 4.01 -4.91 - -3.08 - - - - - - -
- - - - 1.85 - - - -1.85 -1.86 - 4.12 -2.0 - -2.48 - - - - - - -
AMTR_s00147p00102150 (evm_27.TU.AmTr_v1.0_scaffold00147.58)
- - - - 1.49 - - - - - - 4.26 - - - - - - - - - -
- - - - - - - - - - 1.55 4.18 - - -3.06 - - - - -0.55 - -2.78
AMTR_s00162p00021780 (evm_27.TU.AmTr_v1.0_scaffold00162.3)
- - - - 2.2 - - -6.59 - - - 4.03 - - 0.15 - - - - - - -
AMTR_s00163p00057660 (evm_27.TU.AmTr_v1.0_scaffold00163.21)
- - - - 2.21 - -1.47 - -1.29 -1.39 - 3.76 -0.89 -2.86 -1.94 - - - - 0.82 - -
AMTR_s00200p00018150 (evm_27.TU.AmTr_v1.0_scaffold00200.4)
- - - - 1.57 - - - - - - 4.25 - - - - - - - - - -
AMTR_s00232p00018200 (evm_27.TU.AmTr_v1.0_scaffold00232.5)
- - - - 1.92 - - - - - - 4.15 - - -1.06 - - - - - - -
AMTR_s00239p00006910 (evm_27.TU.AmTr_v1.0_scaffold00239.1)
- - - - 2.22 - - - -2.22 - - 4.04 - -3.66 -0.73 - - - - - - -
AMTR_s00302p00018160 (evm_27.TU.AmTr_v1.0_scaffold00302.3)
- - - - 2.15 - - - - - - 4.14 - - - - - - - - - -
AMTR_s01576p00007880 (evm_27.TU.AmTr_v1.0_scaffold01576.1)
- - - - 1.33 - - - -1.78 - - 4.2 - -4.42 -0.46 - - - - - - -
- - - - -0.62 - - - -3.83 - 2.36 3.98 - - -1.69 - - - - - - -

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.