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  5. AMTR_s00041p00232150

AMTR_s00041p00232150 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00041.275

Description : Probable alkaline/neutral invertase B OS=Arabidopsis thaliana


Gene families : OG0000598 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000598_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00041p00232150
Cluster HCCA: Cluster_81

Target Alias Description ECC score Gene Family Method Actions
AT1G35580 CINV1 cytosolic invertase 1 0.04 OrthoFinder output from all 47 species
Adi_g050211 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g103457 CINV2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g03310 No alias alkaline sucrose-specific invertase *(CIN) & original... 0.03 OrthoFinder output from all 47 species
Aop_g11777 CINV2 alkaline sucrose-specific invertase *(CIN) & original... 0.02 OrthoFinder output from all 47 species
Aop_g54058 CINV2 alkaline sucrose-specific invertase *(CIN) & original... 0.05 OrthoFinder output from all 47 species
Aspi01Gene04372.t1 CINV2, Aspi01Gene04372 alkaline sucrose-specific invertase *(CIN) & original... 0.03 OrthoFinder output from all 47 species
Cba_g14138 CINV2 alkaline sucrose-specific invertase *(CIN) & original... 0.03 OrthoFinder output from all 47 species
Ceric.1Z036000.1 Ceric.1Z036000 alkaline sucrose-specific invertase *(CIN) & original... 0.03 OrthoFinder output from all 47 species
Ceric.20G042300.1 Ceric.20G042300 alkaline sucrose-specific invertase *(CIN) & original... 0.04 OrthoFinder output from all 47 species
Ceric.28G004700.1 Ceric.28G004700 alkaline sucrose-specific invertase *(CIN) & original... 0.03 OrthoFinder output from all 47 species
Dcu_g07002 No alias alkaline sucrose-specific invertase *(CIN) & original... 0.03 OrthoFinder output from all 47 species
Dcu_g14094 No alias alkaline sucrose-specific invertase *(CIN) & original... 0.03 OrthoFinder output from all 47 species
Dde_g25563 CINV2 alkaline sucrose-specific invertase *(CIN) & original... 0.04 OrthoFinder output from all 47 species
Ehy_g05905 CINV2 alkaline sucrose-specific invertase *(CIN) & original... 0.03 OrthoFinder output from all 47 species
Ehy_g06145 CINV2 alkaline sucrose-specific invertase *(CIN) & original... 0.02 OrthoFinder output from all 47 species
LOC_Os02g34560.1 CINV2, LOC_Os02g34560 alkaline sucrose-specific invertase (CIN) 0.03 OrthoFinder output from all 47 species
Len_g13993 No alias alkaline sucrose-specific invertase *(CIN) & original... 0.03 OrthoFinder output from all 47 species
Len_g33771 No alias alkaline sucrose-specific invertase *(CIN) & original... 0.03 OrthoFinder output from all 47 species
Mp2g25990.1 No alias alkaline sucrose-specific invertase (CIN) 0.05 OrthoFinder output from all 47 species
Msp_g26277 CINV2 alkaline sucrose-specific invertase *(CIN) & original... 0.04 OrthoFinder output from all 47 species
Msp_g28997 CINV2 alkaline sucrose-specific invertase *(CIN) & original... 0.04 OrthoFinder output from all 47 species
Msp_g30245 No alias alkaline sucrose-specific invertase *(CIN) & original... 0.02 OrthoFinder output from all 47 species
Nbi_g17988 CINV2 alkaline sucrose-specific invertase *(CIN) & original... 0.03 OrthoFinder output from all 47 species
Ore_g18473 No alias alkaline sucrose-specific invertase *(CIN) & original... 0.02 OrthoFinder output from all 47 species
Pir_g30405 CINV2 alkaline sucrose-specific invertase *(CIN) & original... 0.03 OrthoFinder output from all 47 species
Pnu_g14041 CINV2 alkaline sucrose-specific invertase *(CIN) & original... 0.04 OrthoFinder output from all 47 species
Pnu_g30114 CINV2 alkaline sucrose-specific invertase *(CIN) & original... 0.03 OrthoFinder output from all 47 species
Smo89558 No alias Probable alkaline/neutral invertase B OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
Solyc11g020610.3.1 CINV2, Solyc11g020610 alkaline sucrose-specific invertase (CIN) 0.03 OrthoFinder output from all 47 species
Spa_g34773 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e023410_P002 CINV2, Zm00001e023410 alkaline sucrose-specific invertase (CIN) 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0033926 glycopeptide alpha-N-acetylgalactosaminidase activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003849 3-deoxy-7-phosphoheptulonate synthase activity IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
BP GO:0009072 aromatic amino acid metabolic process IEP HCCA
BP GO:0009073 aromatic amino acid family biosynthetic process IEP HCCA
MF GO:0010181 FMN binding IEP HCCA
BP GO:0016053 organic acid biosynthetic process IEP HCCA
BP GO:0016192 vesicle-mediated transport IEP HCCA
MF GO:0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016765 transferase activity, transferring alkyl or aryl (other than methyl) groups IEP HCCA
MF GO:0016903 oxidoreductase activity, acting on the aldehyde or oxo group of donors IEP HCCA
BP GO:0055114 obsolete oxidation-reduction process IEP HCCA
InterPro domains Description Start Stop
IPR024746 Glyco_hydro_100 101 537
No external refs found!