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  5. AMTR_s00041p00189930

AMTR_s00041p00189930 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00041.162

Description : Eukaryotic translation initiation factor 4B3 OS=Arabidopsis thaliana


Gene families : OG0001303 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001303_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00041p00189930

Target Alias Description ECC score Gene Family Method Actions
Adi_g022809 EIF4B1 mRNA unwinding factor *(eIF4B)) & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g060043 EIF4B1 mRNA unwinding factor *(eIF4B)) & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene64177.t1 EIF4B2, Aspi01Gene64177 mRNA unwinding factor *(eIF4B)) & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g16525 EIF4B1 mRNA unwinding factor *(eIF4B)) & original description: none 0.04 OrthoFinder output from all 47 species
MA_9805477g0010 EIF4B1 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Nbi_g08387 EIF4B2 mRNA unwinding factor *(eIF4B)) & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g37019 EIF4B2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g18901 EIF4B2 mRNA unwinding factor *(eIF4B)) & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g02327 EIF4B2 mRNA unwinding factor *(eIF4B)) & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g30076 EIF4B1 mRNA unwinding factor *(eIF4B)) & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000151 ubiquitin ligase complex IEP HCCA
MF GO:0004672 protein kinase activity IEP HCCA
MF GO:0004842 ubiquitin-protein transferase activity IEP HCCA
BP GO:0006468 protein phosphorylation IEP HCCA
BP GO:0006793 phosphorus metabolic process IEP HCCA
BP GO:0006796 phosphate-containing compound metabolic process IEP HCCA
BP GO:0008037 cell recognition IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0009966 regulation of signal transduction IEP HCCA
BP GO:0010646 regulation of cell communication IEP HCCA
MF GO:0016301 kinase activity IEP HCCA
BP GO:0016310 phosphorylation IEP HCCA
BP GO:0016567 protein ubiquitination IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP HCCA
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
MF GO:0019787 ubiquitin-like protein transferase activity IEP HCCA
BP GO:0023051 regulation of signaling IEP HCCA
BP GO:0032012 regulation of ARF protein signal transduction IEP HCCA
BP GO:0032446 protein modification by small protein conjugation IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
BP GO:0046578 regulation of Ras protein signal transduction IEP HCCA
BP GO:0048544 recognition of pollen IEP HCCA
BP GO:0048583 regulation of response to stimulus IEP HCCA
BP GO:0051056 regulation of small GTPase mediated signal transduction IEP HCCA
BP GO:0070647 protein modification by small protein conjugation or removal IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
BP GO:1902531 regulation of intracellular signal transduction IEP HCCA
InterPro domains Description Start Stop
IPR010433 EIF-4B_pln 4 183
IPR010433 EIF-4B_pln 317 358
IPR010433 EIF-4B_pln 175 299
No external refs found!