Sequence Description Alias PCC hrr AMTR_s00044p00145170 Protein degradation.peptide tagging.Ubiquitin (UBQ)-anchor addition (ubiquitylation).UBQ-ligase E3 activities.U-Box E3 ligase activities.PUB-type PUB44, SAUL1, ATPUB44, evm_27.TU.AmTr_v1.0_scaffold00044.147 0.8850871516348089 6 AMTR_s00010p00257890 RNA biosynthesis.transcriptional activation.TCP transcription factor evm_27.TU.AmTr_v1.0_scaffold00010.407 0.8648437210968107 2 AMTR_s00142p00054380 RNA processing.RNA quality control Exon Junction complex (EJC).core components.CASC3 component evm_27.TU.AmTr_v1.0_scaffold00142.31 0.8575406785485797 3 AMTR_s00002p00225810 RNA biosynthesis.transcriptional activation.bHLH transcription factor ATMYC2, MYC2, RD22BP1, JIN1, ZBF1, JAI1, evm_27.TU.AmTr_v1.0_scaffold00002.248 0.8529489134076677 12 AMTR_s00103p00067500 Multi-process regulation.circadian clock.TIC circadian clock regulator TIC, evm_27.TU.AmTr_v1.0_scaffold00103.34 0.8502298529565766 9 AMTR_s00106p00051260 evm_27.TU.AmTr_v1.0_scaffold00106.29 0.8484241401229203 6 AMTR_s00065p00171490 RNA processing.RNA 3-end polyadenylation.Cleavage and Polyadenylation Specificity Factor (CPSF) complex.Fip1 component FIP1[V], ATFIP1[V], FIPS5, ATFIPS5, evm_27.TU.AmTr_v1.0_scaffold00065.140 0.8443569648712735 12 AMTR_s00010p00175790 evm_27.TU.AmTr_v1.0_scaffold00010.142 0.8276102003103831 16 AMTR_s00186p00018500 RNA biosynthesis.transcriptional activation.GRAS transcription factor SCL1, evm_27.TU.AmTr_v1.0_scaffold00186.3 0.8241488230282579 34 AMTR_s00058p00090300 RNA biosynthesis.transcriptional activation.WRKY transcription factor WRKY4, evm_27.TU.AmTr_v1.0_scaffold00058.48 0.8224038854816779 13 AMTR_s00009p00164260 Eukaryotic translation initiation factor isoform 4G-1 OS=Arabidopsis thaliana eIFiso4G1, evm_27.TU.AmTr_v1.0_scaffold00009.92 0.8129095105163028 11 AMTR_s00079p00188790 Protein modification.phosphorylation.TKL kinase superfamily.LRK10-1-like kinase evm_27.TU.AmTr_v1.0_scaffold00079.112 0.8112374917230059 49 AMTR_s00001p00263690 evm_27.TU.AmTr_v1.0_scaffold00001.395 0.8081322552300889 26 AMTR_s00120p00076230 Protein modification.phosphorylation.TKL kinase superfamily.LRR-III kinase TMKL1, evm_27.TU.AmTr_v1.0_scaffold00120.33 0.8078821631149633 14 AMTR_s00002p00269600 Vesicle trafficking.Coat protein I (COPI) coatomer machinery.ARF-GTPase guanyl-nucleotide exchange factor (ARF-GEF) activities.GBF-type ARF-GEF factor GN, EMB30, VAN7, evm_27.TU.AmTr_v1.0_scaffold00002.551 0.8068057138601327 15 AMTR_s00069p00055450 COMPASS-like H3K4 histone methylase component WDR5A OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00069.33 0.8027811950541117 16 AMTR_s00138p00043730 Enzyme classification.EC_2 transferases.EC_2.7 transferase transferring phosphorus-containing group evm_27.TU.AmTr_v1.0_scaffold00138.18 0.7969006788005811 18 AMTR_s00072p00181720 External stimuli response.temperature.Hsp (heat-shock-responsive protein) families.Hsp70 family.DnaK protein ATHSP70, HSP70 0.7901195664258933 26 AMTR_s00008p00210700 Coenzyme metabolism.FMN/FAD biosynthesis.bifunctional GTP cyclohydrolase II (RibA) and DHBP synthase (RibB) GCH, ATGCH, RFD1, ATRIBA1, evm_27.TU.AmTr_v1.0_scaffold00008.133 0.7877442397380988 38 AMTR_s00041p00118190 Protein degradation.peptide tagging.Ubiquitin (UBQ)-anchor addition (ubiquitylation).UBQ-ligase E3 activities.U-Box E3 ligase activities.PUB-type evm_27.TU.AmTr_v1.0_scaffold00041.82 0.785594883943908 58 AMTR_s00025p00249370 Lipid metabolism.lipid degradation.fatty acid degradation.auxiliary degradation activities.dodecenoyl-CoA isomerase ECI2, PEC12, ATECI2, ECHIB, IBR10, evm_27.TU.AmTr_v1.0_scaffold00025.410 0.7841045233719545 23 AMTR_s00119p00117410 RNA biosynthesis.transcriptional activation.EIL (EIN3-like) transcription factor EIL1, AtEIL1, evm_27.TU.AmTr_v1.0_scaffold00119.91 0.783157812049825 85 AMTR_s00015p00251000 Enzyme classification.EC_2 transferases.EC_2.4 glycosyltransferase GT72B1, UGT72B1, evm_27.TU.AmTr_v1.0_scaffold00015.101 0.7799596139365954 25 AMTR_s00056p00117010 Solute transport.primary active transport.ABC superfamily.ABC2 family.subfamily ABCG transporter PEN3, ABCG36, ATPDR8, ATABCG36, PDR8, evm_27.TU.AmTr_v1.0_scaffold00056.84 0.7799503769115228 29 AMTR_s00019p00256650 Protein modification.phosphorylation.TKL kinase superfamily.RKF3 kinase RKF3, evm_27.TU.AmTr_v1.0_scaffold00019.455 0.7753099757969268 28 AMTR_s00013p00162620 Carbohydrate metabolism.nucleotide sugar biosynthesis.UDP-L-arabinose synthesis.UDP-L-arabinose mutase ATRGP1, RGP1, evm_27.TU.AmTr_v1.0_scaffold00013.86 0.7746175136905494 32 AMTR_s00006p00266790 Solute transport.carrier-mediated transport.DMT superfamily.NST-TPT group.UAfT nucleotide sugar transporter evm_27.TU.AmTr_v1.0_scaffold00006.292 0.7729801631234241 68 AMTR_s00067p00199640 Protein modification.phosphorylation.TKL kinase superfamily.LRR-XII kinase evm_27.TU.AmTr_v1.0_scaffold00067.215 0.7725831853098131 70 AMTR_s00061p00050690 RNA biosynthesis.transcriptional activation.WRKY transcription factor WRKY2, ATWRKY2, evm_27.TU.AmTr_v1.0_scaffold00061.28 0.7667719235314147 36 AMTR_s00072p00171260 Protein degradation.peptide tagging.Ubiquitin (UBQ)-anchor addition (ubiquitylation).UBQ-ligase E3 activities.U-Box E3 ligase activities.PUB-type PUB14, ATPUB14, evm_27.TU.AmTr_v1.0_scaffold00072.119 0.7653401508956259 50 AMTR_s00061p00194590 WEB family protein At5g55860 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00061.227 0.7597878441534718 39 AMTR_s00135p00069650 Protein degradation.peptide tagging.Ubiquitin (UBQ)-anchor addition (ubiquitylation).UBQ-ligase E3 activities.Cullin-based ubiquitylation complexes.CUL3-BTB E3 ligase complexes.BTB/POZ substrate adaptor components.NPH3 component RPT3, NPH3, JK218, evm_27.TU.AmTr_v1.0_scaffold00135.33 0.7568053750990525 54 AMTR_s00061p00071760 evm_27.TU.AmTr_v1.0_scaffold00061.47 0.7562769345973619 74 AMTR_s00045p00227260 Protein degradation.peptide tagging.Ubiquitin (UBQ)-anchor addition (ubiquitylation).UBQ-ligase E3 activities.Cullin-based ubiquitylation complexes.SKP1-CUL1-FBX (SCF) E3 ligase complexes.F-BOX substrate adaptor components.FBX component EID1, evm_27.TU.AmTr_v1.0_scaffold00045.327 0.7562203196625386 44 AMTR_s00012p00264900 Protein modification.phosphorylation.TKL kinase superfamily.G-Lectin kinase families.SD-2 kinase evm_27.TU.AmTr_v1.0_scaffold00012.366 0.7547609337958557 46 AMTR_s00010p00261170 Protein degradation.peptide tagging.Ubiquitin (UBQ)-anchor addition (ubiquitylation).UBQ-ligase E3 activities.RING-domain E3 ligase activities.RING-v-type E3 ligase evm_27.TU.AmTr_v1.0_scaffold00010.450 0.7540363448784827 47 AMTR_s00030p00143350 MKS1, evm_27.TU.AmTr_v1.0_scaffold00030.91 0.7508208093576958 76 AMTR_s00012p00221000 External stimuli response.biotic stress.pathogen-associated molecular pattern (PAMP).PTI (pattern-triggered immunity) network.bacterial elicitor response.BIK1 kinase APK1B, PK1B, evm_27.TU.AmTr_v1.0_scaffold00012.165 0.7440271480711852 70 AMTR_s00011p00091530 evm_27.TU.AmTr_v1.0_scaffold00011.23 0.7393287003122389 56 AMTR_s00069p00100460 IQD22, evm_27.TU.AmTr_v1.0_scaffold00069.63 0.7391761933534793 58 AMTR_s00034p00071480 Ankyrin repeat-containing protein ITN1 OS=Arabidopsis thaliana ITN1, evm_27.TU.AmTr_v1.0_scaffold00034.17 0.7390094309778011 71 AMTR_s00009p00164690 Protein biosynthesis.translation initiation.mRNA loading.eIF-iso4F unwinding complex.eIF-iso4G component eIFiso4G1, evm_27.TU.AmTr_v1.0_scaffold00009.93 0.7368668715462863 63 AMTR_s00002p00167510 Amino acid metabolism.biosynthesis.shikimate family.shikimate pathway.3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) synthase evm_27.TU.AmTr_v1.0_scaffold00002.141 0.7299515283579405 73 AMTR_s00068p00175660 evm_27.TU.AmTr_v1.0_scaffold00068.129 0.7287372967387558 75 AMTR_s00021p00172130 Solute transport.channels.GLR ligand-gated cation channel GLR2.7, ATGLR2.7, evm_27.TU.AmTr_v1.0_scaffold00021.125 0.7239089449073075 80 AMTR_s00114p00018640 Protein biosynthesis.translation initiation.mRNA loading.eIF4B mRNA unwinding factor EIF4B1, evm_27.TU.AmTr_v1.0_scaffold00114.4 0.7219686070000509 89 AMTR_s00023p00220060 Protein degradation.peptidase families.metallopeptidase activities.aminopeptidase activities.M1 neutral/aromatic-hydroxyl amino acid aminopeptidase evm_27.TU.AmTr_v1.0_scaffold00023.164 0.7217151669917273 92 AMTR_s00010p00171880 evm_27.TU.AmTr_v1.0_scaffold00010.138 0.7209342797496695 85 AMTR_s00077p00184480 Protein LURP-one-related 8 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00077.212 0.7189497119308085 88 AMTR_s00023p00252870 evm_27.TU.AmTr_v1.0_scaffold00023.249 0.7175129416380512 90 AMTR_s00072p00015740 evm_27.TU.AmTr_v1.0_scaffold00072.1 0.7153571774462637 93 AMTR_s00106p00051220 evm_27.TU.AmTr_v1.0_scaffold00106.28 0.7121311086465909 98