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  5. AMTR_s00041p00031550

AMTR_s00041p00031550 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00041.15

Description : Vesicle trafficking.Coat protein I (COPI) coatomer machinery.ARF-GTPase guanyl-nucleotide exchange factor (ARF-GEF) activities.BIG-type ARF-GEF factor


Gene families : OG0001094 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001094_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00041p00031550

Target Alias Description ECC score Gene Family Method Actions
AT1G01960 EDA10 SEC7-like guanine nucleotide exchange family protein 0.08 OrthoFinder output from all 47 species
AT3G43300 ATMIN7, BEN1 HOPM interactor 7 0.07 OrthoFinder output from all 47 species
AT3G60860 No alias SEC7-like guanine nucleotide exchange family protein 0.07 OrthoFinder output from all 47 species
AT4G35380 No alias SEC7-like guanine nucleotide exchange family protein 0.04 OrthoFinder output from all 47 species
AT4G38200 No alias SEC7-like guanine nucleotide exchange family protein 0.06 OrthoFinder output from all 47 species
Adi_g019376 No alias ARF-GTPase guanyl-nucleotide exchange factor *(BIG) &... 0.07 OrthoFinder output from all 47 species
Adi_g019462 ATMIN7, BEN1 ARF-GTPase guanyl-nucleotide exchange factor *(BIG) &... 0.04 OrthoFinder output from all 47 species
Aev_g01609 No alias ARF-GTPase guanyl-nucleotide exchange factor *(BIG) &... 0.02 OrthoFinder output from all 47 species
Aev_g05544 ATMIN7, BEN1 ARF-GTPase guanyl-nucleotide exchange factor *(BIG) &... 0.03 OrthoFinder output from all 47 species
Ala_g02716 ATMIN7, BEN1 ARF-GTPase guanyl-nucleotide exchange factor *(BIG) &... 0.05 OrthoFinder output from all 47 species
Ala_g11392 No alias ARF-GTPase guanyl-nucleotide exchange factor *(BIG) &... 0.04 OrthoFinder output from all 47 species
Als_g01210 ATMIN7, BEN1 ARF-GTPase guanyl-nucleotide exchange factor *(BIG) &... 0.08 OrthoFinder output from all 47 species
Als_g01216 No alias ARF-GTPase guanyl-nucleotide exchange factor *(BIG) &... 0.03 OrthoFinder output from all 47 species
Aob_g07437 ATMIN7, BEN1 ARF-GTPase guanyl-nucleotide exchange factor *(BIG) &... 0.06 OrthoFinder output from all 47 species
Aop_g37895 No alias ARF-GTPase guanyl-nucleotide exchange factor *(BIG) &... 0.02 OrthoFinder output from all 47 species
Aspi01Gene06196.t1 ATMIN7, BEN1,... ARF-GTPase guanyl-nucleotide exchange factor *(BIG) &... 0.03 OrthoFinder output from all 47 species
Azfi_s0015.g013898 No alias ARF-GTPase guanyl-nucleotide exchange factor *(BIG) &... 0.08 OrthoFinder output from all 47 species
Azfi_s0048.g030483 ATMIN7, BEN1 ARF-GTPase guanyl-nucleotide exchange factor *(BIG) &... 0.03 OrthoFinder output from all 47 species
Azfi_s0199.g057483 EDA10 ARF-GTPase guanyl-nucleotide exchange factor *(BIG) &... 0.03 OrthoFinder output from all 47 species
Cba_g01354 ATMIN7, BEN1 ARF-GTPase guanyl-nucleotide exchange factor *(BIG) &... 0.05 OrthoFinder output from all 47 species
Ceric.35G045800.1 ATMIN7, BEN1,... ARF-GTPase guanyl-nucleotide exchange factor *(BIG) &... 0.05 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000852.23 No alias Vesicle trafficking.Coat protein I (COPI) coatomer... 0.04 OrthoFinder output from all 47 species
Cre09.g390319 EDA10 Vesicle trafficking.Coat protein I (COPI) coatomer... 0.02 OrthoFinder output from all 47 species
Dac_g10967 No alias ARF-GTPase guanyl-nucleotide exchange factor *(BIG) &... 0.02 OrthoFinder output from all 47 species
Dcu_g05847 No alias ARF-GTPase guanyl-nucleotide exchange factor *(BIG) &... 0.04 OrthoFinder output from all 47 species
Dcu_g10762 ATMIN7, BEN1 ARF-GTPase guanyl-nucleotide exchange factor *(BIG) &... 0.04 OrthoFinder output from all 47 species
Dde_g10500 No alias ARF-GTPase guanyl-nucleotide exchange factor *(BIG) &... 0.04 OrthoFinder output from all 47 species
Dde_g21336 ATMIN7, BEN1 ARF-GTPase guanyl-nucleotide exchange factor *(BIG) &... 0.04 OrthoFinder output from all 47 species
Ehy_g08695 No alias ARF-GTPase guanyl-nucleotide exchange factor *(BIG) &... 0.03 OrthoFinder output from all 47 species
Ehy_g09277 No alias ARF-GTPase guanyl-nucleotide exchange factor *(BIG) &... 0.04 OrthoFinder output from all 47 species
Ehy_g17896 ATMIN7, BEN1 ARF-GTPase guanyl-nucleotide exchange factor *(BIG) &... 0.03 OrthoFinder output from all 47 species
GSVIVT01014993001 ATMIN7, BEN1 Vesicle trafficking.Coat protein I (COPI) coatomer... 0.05 OrthoFinder output from all 47 species
GSVIVT01023854001 No alias Vesicle trafficking.Coat protein I (COPI) coatomer... 0.11 OrthoFinder output from all 47 species
GSVIVT01027623001 No alias Vesicle trafficking.Coat protein I (COPI) coatomer... 0.1 OrthoFinder output from all 47 species
Gb_04048 No alias BIG-type ARF-GTPase guanyl-nucleotide exchange factor 0.07 OrthoFinder output from all 47 species
Gb_07642 ATMIN7, BEN1 BIG-type ARF-GTPase guanyl-nucleotide exchange factor 0.05 OrthoFinder output from all 47 species
Gb_26513 No alias BIG-type ARF-GTPase guanyl-nucleotide exchange factor 0.1 OrthoFinder output from all 47 species
LOC_Os03g14260.1 LOC_Os03g14260 BIG-type ARF-GTPase guanyl-nucleotide exchange factor 0.04 OrthoFinder output from all 47 species
LOC_Os07g37750.1 ATMIN7, BEN1,... BIG-type ARF-GTPase guanyl-nucleotide exchange factor 0.06 OrthoFinder output from all 47 species
Len_g10327 No alias ARF-GTPase guanyl-nucleotide exchange factor *(BIG) &... 0.04 OrthoFinder output from all 47 species
Len_g23975 ATMIN7, BEN1 ARF-GTPase guanyl-nucleotide exchange factor *(BIG) &... 0.05 OrthoFinder output from all 47 species
Lfl_g02471 ATMIN7, BEN1 ARF-GTPase guanyl-nucleotide exchange factor *(BIG) &... 0.07 OrthoFinder output from all 47 species
MA_10429864g0010 No alias BIG-type ARF-GTPase guanyl-nucleotide exchange factor 0.04 OrthoFinder output from all 47 species
MA_157279g0010 EDA10 Brefeldin A-inhibited guanine nucleotide-exchange... 0.04 OrthoFinder output from all 47 species
MA_20138g0010 ATMIN7, BEN1 BIG-type ARF-GTPase guanyl-nucleotide exchange factor 0.08 OrthoFinder output from all 47 species
MA_20138g0020 ATMIN7, BEN1 Brefeldin A-inhibited guanine nucleotide-exchange... 0.04 OrthoFinder output from all 47 species
MA_20563g0010 No alias BIG-type ARF-GTPase guanyl-nucleotide exchange factor 0.06 OrthoFinder output from all 47 species
MA_9806849g0010 No alias Brefeldin A-inhibited guanine nucleotide-exchange... 0.04 OrthoFinder output from all 47 species
Mp7g11590.1 ATMIN7, BEN1 BIG-type ARF-GTPase guanyl-nucleotide exchange factor 0.06 OrthoFinder output from all 47 species
Mp8g18220.1 No alias BIG-type ARF-GTPase guanyl-nucleotide exchange factor 0.09 OrthoFinder output from all 47 species
Msp_g13471 ATMIN7, BEN1 ARF-GTPase guanyl-nucleotide exchange factor *(BIG) &... 0.03 OrthoFinder output from all 47 species
Msp_g22519 No alias ARF-GTPase guanyl-nucleotide exchange factor *(BIG) &... 0.03 OrthoFinder output from all 47 species
Nbi_g01508 ATMIN7, BEN1 ARF-GTPase guanyl-nucleotide exchange factor *(BIG) &... 0.06 OrthoFinder output from all 47 species
Ore_g16676 ATMIN7, BEN1 ARF-GTPase guanyl-nucleotide exchange factor *(BIG) &... 0.04 OrthoFinder output from all 47 species
Ore_g29633 EDA10 ARF-GTPase guanyl-nucleotide exchange factor *(BIG) &... 0.03 OrthoFinder output from all 47 species
Pir_g10472 ATMIN7, BEN1 ARF-GTPase guanyl-nucleotide exchange factor *(BIG) &... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0039.g012257 No alias ARF-GTPase guanyl-nucleotide exchange factor *(BIG) &... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0088.g018598 ATMIN7, BEN1 ARF-GTPase guanyl-nucleotide exchange factor *(BIG) &... 0.04 OrthoFinder output from all 47 species
Sam_g11624 No alias ARF-GTPase guanyl-nucleotide exchange factor *(BIG) &... 0.02 OrthoFinder output from all 47 species
Smo173646 No alias Vesicle trafficking.Coat protein I (COPI) coatomer... 0.06 OrthoFinder output from all 47 species
Smo85621 ATMIN7, BEN1 Vesicle trafficking.Coat protein I (COPI) coatomer... 0.02 OrthoFinder output from all 47 species
Solyc01g091460.3.1 Solyc01g091460 BIG-type ARF-GTPase guanyl-nucleotide exchange factor 0.07 OrthoFinder output from all 47 species
Solyc01g112340.3.1 Solyc01g112340 Brefeldin A-inhibited guanine nucleotide-exchange... 0.03 OrthoFinder output from all 47 species
Solyc01g112350.3.1 Solyc01g112350 BIG-type ARF-GTPase guanyl-nucleotide exchange factor 0.04 OrthoFinder output from all 47 species
Solyc12g017830.3.1 ATMIN7, BEN1,... BIG-type ARF-GTPase guanyl-nucleotide exchange factor 0.06 OrthoFinder output from all 47 species
Tin_g02915 ATMIN7, BEN1 ARF-GTPase guanyl-nucleotide exchange factor *(BIG) &... 0.03 OrthoFinder output from all 47 species
Zm00001e001058_P001 Zm00001e001058 BIG-type ARF-GTPase guanyl-nucleotide exchange factor 0.05 OrthoFinder output from all 47 species
Zm00001e010568_P001 ATMIN7, BEN1,... BIG-type ARF-GTPase guanyl-nucleotide exchange factor 0.07 OrthoFinder output from all 47 species
Zm00001e037574_P001 Zm00001e037574 BIG-type ARF-GTPase guanyl-nucleotide exchange factor 0.08 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0032012 regulation of ARF protein signal transduction IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
CC GO:0000145 exocyst IEP HCCA
MF GO:0000166 nucleotide binding IEP HCCA
CC GO:0000228 nuclear chromosome IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0003725 double-stranded RNA binding IEP HCCA
MF GO:0003774 cytoskeletal motor activity IEP HCCA
MF GO:0003779 actin binding IEP HCCA
MF GO:0004672 protein kinase activity IEP HCCA
MF GO:0005198 structural molecule activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
CC GO:0005694 chromosome IEP HCCA
BP GO:0006468 protein phosphorylation IEP HCCA
BP GO:0006793 phosphorus metabolic process IEP HCCA
BP GO:0006796 phosphate-containing compound metabolic process IEP HCCA
BP GO:0006810 transport IEP HCCA
BP GO:0006886 intracellular protein transport IEP HCCA
BP GO:0006887 exocytosis IEP HCCA
BP GO:0006996 organelle organization IEP HCCA
BP GO:0007010 cytoskeleton organization IEP HCCA
MF GO:0008092 cytoskeletal protein binding IEP HCCA
BP GO:0008104 protein localization IEP HCCA
BP GO:0009987 cellular process IEP HCCA
BP GO:0015031 protein transport IEP HCCA
BP GO:0016192 vesicle-mediated transport IEP HCCA
MF GO:0016301 kinase activity IEP HCCA
BP GO:0016310 phosphorylation IEP HCCA
CC GO:0016459 myosin complex IEP HCCA
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP HCCA
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
CC GO:0030117 membrane coat IEP HCCA
CC GO:0030118 clathrin coat IEP HCCA
CC GO:0030120 vesicle coat IEP HCCA
CC GO:0030125 clathrin vesicle coat IEP HCCA
CC GO:0030130 clathrin coat of trans-Golgi network vesicle IEP HCCA
CC GO:0030132 clathrin coat of coated pit IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
BP GO:0032940 secretion by cell IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
BP GO:0033036 macromolecule localization IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
BP GO:0045184 establishment of protein localization IEP HCCA
BP GO:0046903 secretion IEP HCCA
BP GO:0046907 intracellular transport IEP HCCA
BP GO:0051179 localization IEP HCCA
BP GO:0051234 establishment of localization IEP HCCA
BP GO:0051641 cellular localization IEP HCCA
BP GO:0051649 establishment of localization in cell IEP HCCA
BP GO:0070727 cellular macromolecule localization IEP HCCA
BP GO:0071702 organic substance transport IEP HCCA
BP GO:0071705 nitrogen compound transport IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
CC GO:0098796 membrane protein complex IEP HCCA
CC GO:0098797 plasma membrane protein complex IEP HCCA
CC GO:0099023 vesicle tethering complex IEP HCCA
BP GO:0140352 export from cell IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR015403 Mon2/Sec7/BIG1-like_HDS 1153 1238
IPR000904 Sec7_dom 606 789
No external refs found!