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  5. AMTR_s00040p00224930

AMTR_s00040p00224930 (ATAHL1, AHL1,...)


Aliases : ATAHL1, AHL1, evm_27.TU.AmTr_v1.0_scaffold00040.264

Description : AT-hook motif nuclear-localized protein 1 OS=Arabidopsis thaliana


Gene families : OG0000263 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000263_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00040p00224930

Target Alias Description ECC score Gene Family Method Actions
Aev_g03350 No alias AHL clade-B transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Als_g63007 No alias AHL clade-B transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g22194 No alias AHL clade-B transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene18074.t1 Aspi01Gene18074 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g02211 No alias AHL clade-B transcription factor & original description: none 0.01 OrthoFinder output from all 47 species
LOC_Os11g05160.1 ATAHL1, AHL1,... AT-hook motif nuclear-localized protein 1 OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
Len_g03258 ATAHL1, AHL1 AHL clade-B transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Len_g18915 No alias AHL clade-B transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g06468 No alias AHL clade-B transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Mp2g10280.1 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Pir_g10262 No alias AHL clade-B transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0002.g000827 No alias AHL clade-B transcription factor & original description:... 0.01 OrthoFinder output from all 47 species
Sacu_v1.1_s0129.g021940 ATAHL1, AHL1 AHL clade-B transcription factor & original description:... 0.01 OrthoFinder output from all 47 species
Sam_g07850 No alias AHL clade-B transcription factor & original description: none 0.01 OrthoFinder output from all 47 species
Spa_g55077 No alias AHL clade-B transcription factor & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR017956 AT_hook_DNA-bd_motif 64 76
IPR017956 AT_hook_DNA-bd_motif 103 113
IPR005175 PPC_dom 133 250
No external refs found!