1. Home
  2. Species
  3. Amborella trichopoda
  4. Sequence
  5. AMTR_s00040p00128250

AMTR_s00040p00128250 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00040.94

Description : F-box/FBD/LRR-repeat protein At1g13570 OS=Arabidopsis thaliana


Gene families : OG0003405 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003405_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00040p00128250

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00040p00098000 evm_27.TU.AmTr_v1... F-box/FBD/LRR-repeat protein At1g13570 OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
AMTR_s00040p00125500 evm_27.TU.AmTr_v1... No description available 0.04 OrthoFinder output from all 47 species
Solyc05g008470.3.1 Solyc05g008470 F-box/FBD/LRR-repeat protein At1g13570 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Solyc08g074910.3.1 Solyc08g074910 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Solyc11g011230.3.1 Solyc11g011230 F-box/FBD/LRR-repeat protein At1g13570 OS=Arabidopsis... 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
BP GO:0008104 protein localization IEP HCCA
BP GO:0015031 protein transport IEP HCCA
BP GO:0033036 macromolecule localization IEP HCCA
BP GO:0045184 establishment of protein localization IEP HCCA
BP GO:0051641 cellular localization IEP HCCA
BP GO:0070727 cellular macromolecule localization IEP HCCA
BP GO:0071702 organic substance transport IEP HCCA
BP GO:0071705 nitrogen compound transport IEP HCCA
InterPro domains Description Start Stop
IPR001810 F-box_dom 20 56
No external refs found!