Aliases : evm_27.TU.AmTr_v1.0_scaffold00039.227
No description available
Gene families : OG0001446 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001446_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: AMTR_s00039p00236750 | |
Cluster | HCCA: Cluster_39 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AT5G59990 | No alias | CCT motif family protein | 0.04 | OrthoFinder output from all 47 species | |
Azfi_s0052.g031598 | No alias | not classified & original description: CDS=1-1092 | 0.03 | OrthoFinder output from all 47 species | |
Ceric.27G059800.1 | Ceric.27G059800 | CMF transcription factor & original description:... | 0.01 | OrthoFinder output from all 47 species | |
LOC_Os01g61900.1 | LOC_Os01g61900 | no hits & (original description: none) | 0.01 | OrthoFinder output from all 47 species | |
LOC_Os10g32900.1 | LOC_Os10g32900 | no hits & (original description: none) | 0.05 | OrthoFinder output from all 47 species | |
Pnu_g18525 | No alias | CMF transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Sam_g25892 | No alias | CMF transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Solyc07g066510.4.1 | ASML2, Solyc07g066510 | no hits & (original description: none) | 0.02 | OrthoFinder output from all 47 species | |
Zm00001e004626_P002 | Zm00001e004626 | no hits & (original description: none) | 0.02 | OrthoFinder output from all 47 species | |
Zm00001e012722_P001 | Zm00001e012722 | no hits & (original description: none) | 0.04 | OrthoFinder output from all 47 species | |
Zm00001e020093_P001 | Zm00001e020093 | no hits & (original description: none) | 0.01 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0005515 | protein binding | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds | IEP | HCCA |
MF | GO:0004650 | polygalacturonase activity | IEP | HCCA |
BP | GO:0005975 | carbohydrate metabolic process | IEP | HCCA |
BP | GO:0005984 | disaccharide metabolic process | IEP | HCCA |
BP | GO:0005991 | trehalose metabolic process | IEP | HCCA |
BP | GO:0005992 | trehalose biosynthetic process | IEP | HCCA |
BP | GO:0006810 | transport | IEP | HCCA |
BP | GO:0006811 | monoatomic ion transport | IEP | HCCA |
BP | GO:0006812 | monoatomic cation transport | IEP | HCCA |
BP | GO:0008150 | biological_process | IEP | HCCA |
MF | GO:0008234 | cysteine-type peptidase activity | IEP | HCCA |
MF | GO:0008375 | acetylglucosaminyltransferase activity | IEP | HCCA |
BP | GO:0009311 | oligosaccharide metabolic process | IEP | HCCA |
BP | GO:0009312 | oligosaccharide biosynthetic process | IEP | HCCA |
MF | GO:0015299 | obsolete solute:proton antiporter activity | IEP | HCCA |
MF | GO:0016798 | hydrolase activity, acting on glycosyl bonds | IEP | HCCA |
BP | GO:0046351 | disaccharide biosynthetic process | IEP | HCCA |
BP | GO:0051179 | localization | IEP | HCCA |
BP | GO:0051234 | establishment of localization | IEP | HCCA |
BP | GO:0055085 | transmembrane transport | IEP | HCCA |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR010402 | CCT_domain | 320 | 364 |
No external refs found! |