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  5. AMTR_s00039p00228400

AMTR_s00039p00228400 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00039.211

No description available


Gene families : OG0000432 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000432_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00039p00228400

Target Alias Description ECC score Gene Family Method Actions
AT5G43960 No alias Nuclear transport factor 2 (NTF2) family protein with... 0.03 OrthoFinder output from all 47 species
AT5G60980 No alias Nuclear transport factor 2 (NTF2) family protein with... 0.03 OrthoFinder output from all 47 species
Adi_g010072 No alias mRNA endoribonuclease *(G3BP) & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g036227 No alias mRNA endoribonuclease *(G3BP) & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g079969 No alias mRNA endoribonuclease *(G3BP) & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g25747 No alias mRNA endoribonuclease *(G3BP) & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g02233 No alias mRNA endoribonuclease *(G3BP) & original description: none 0.02 OrthoFinder output from all 47 species
Als_g23469 No alias mRNA endoribonuclease *(G3BP) & original description: none 0.02 OrthoFinder output from all 47 species
Als_g37554 No alias mRNA endoribonuclease *(G3BP) & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g13702 No alias mRNA endoribonuclease *(G3BP) & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene20239.t1 Aspi01Gene20239 mRNA endoribonuclease *(G3BP) & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s1446.g103197 No alias mRNA endoribonuclease *(G3BP) & original description:... 0.03 OrthoFinder output from all 47 species
Ceric.05G103300.1 Ceric.05G103300 mRNA endoribonuclease *(G3BP) & original description:... 0.02 OrthoFinder output from all 47 species
Ceric.25G013600.1 Ceric.25G013600 mRNA endoribonuclease *(G3BP) & original description:... 0.02 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000829.14 No alias No description available 0.02 OrthoFinder output from all 47 species
Dcu_g10558 No alias mRNA endoribonuclease *(G3BP) & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g16246 No alias mRNA endoribonuclease *(G3BP) & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g42375 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g19064 No alias mRNA endoribonuclease *(G3BP) & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g31054 No alias mRNA endoribonuclease *(G3BP) & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01027918001 No alias No description available 0.04 OrthoFinder output from all 47 species
LOC_Os02g03890.1 LOC_Os02g03890 mRNA endoribonuclease (G3BP) 0.02 OrthoFinder output from all 47 species
LOC_Os04g30430.1 LOC_Os04g30430 mRNA endoribonuclease (G3BP) 0.03 OrthoFinder output from all 47 species
LOC_Os04g43150.2 LOC_Os04g43150 mRNA endoribonuclease (G3BP) 0.03 OrthoFinder output from all 47 species
LOC_Os07g41180.1 LOC_Os07g41180 mRNA endoribonuclease (G3BP) 0.03 OrthoFinder output from all 47 species
Len_g15747 No alias mRNA endoribonuclease *(G3BP) & original description: none 0.02 OrthoFinder output from all 47 species
Len_g21624 No alias mRNA endoribonuclease *(G3BP) & original description: none 0.04 OrthoFinder output from all 47 species
Mp4g17080.1 No alias mRNA endoribonuclease (G3BP) 0.03 OrthoFinder output from all 47 species
Msp_g07609 No alias mRNA endoribonuclease *(G3BP) & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g21351 No alias mRNA endoribonuclease *(G3BP) & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g11272 No alias mRNA endoribonuclease *(G3BP) & original description: none 0.02 OrthoFinder output from all 47 species
Solyc06g083730.3.1 Solyc06g083730 mRNA endoribonuclease (G3BP) 0.05 OrthoFinder output from all 47 species
Spa_g06094 No alias mRNA endoribonuclease *(G3BP) & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e014590_P001 Zm00001e014590 mRNA endoribonuclease (G3BP) 0.02 OrthoFinder output from all 47 species
Zm00001e035428_P001 Zm00001e035428 mRNA endoribonuclease (G3BP) 0.03 OrthoFinder output from all 47 species
Zm00001e038048_P001 Zm00001e038048 mRNA endoribonuclease (G3BP) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0005622 intracellular anatomical structure IEA Interproscan
BP GO:0006810 transport IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000287 magnesium ion binding IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003743 translation initiation factor activity IEP HCCA
MF GO:0004055 argininosuccinate synthase activity IEP HCCA
MF GO:0004427 inorganic diphosphate phosphatase activity IEP HCCA
MF GO:0004576 oligosaccharyl transferase activity IEP HCCA
MF GO:0004743 pyruvate kinase activity IEP HCCA
CC GO:0005852 eukaryotic translation initiation factor 3 complex IEP HCCA
BP GO:0006082 organic acid metabolic process IEP HCCA
BP GO:0006090 pyruvate metabolic process IEP HCCA
BP GO:0006091 generation of precursor metabolites and energy IEP HCCA
BP GO:0006096 glycolytic process IEP HCCA
BP GO:0006165 nucleoside diphosphate phosphorylation IEP HCCA
BP GO:0006413 translational initiation IEP HCCA
BP GO:0006486 protein glycosylation IEP HCCA
BP GO:0006525 arginine metabolic process IEP HCCA
BP GO:0006526 arginine biosynthetic process IEP HCCA
BP GO:0006757 ATP generation from ADP IEP HCCA
MF GO:0008135 translation factor activity, RNA binding IEP HCCA
MF GO:0008194 UDP-glycosyltransferase activity IEP HCCA
MF GO:0008375 acetylglucosaminyltransferase activity IEP HCCA
BP GO:0008652 amino acid biosynthetic process IEP HCCA
BP GO:0009064 glutamine family amino acid metabolic process IEP HCCA
BP GO:0009084 glutamine family amino acid biosynthetic process IEP HCCA
BP GO:0009132 nucleoside diphosphate metabolic process IEP HCCA
BP GO:0009135 purine nucleoside diphosphate metabolic process IEP HCCA
BP GO:0009141 nucleoside triphosphate metabolic process IEP HCCA
BP GO:0009144 purine nucleoside triphosphate metabolic process IEP HCCA
BP GO:0009150 purine ribonucleotide metabolic process IEP HCCA
BP GO:0009179 purine ribonucleoside diphosphate metabolic process IEP HCCA
BP GO:0009185 ribonucleoside diphosphate metabolic process IEP HCCA
BP GO:0009199 ribonucleoside triphosphate metabolic process IEP HCCA
BP GO:0009205 purine ribonucleoside triphosphate metabolic process IEP HCCA
BP GO:0009259 ribonucleotide metabolic process IEP HCCA
MF GO:0009678 pyrophosphate hydrolysis-driven proton transmembrane transporter activity IEP HCCA
BP GO:0009987 cellular process IEP HCCA
MF GO:0015078 proton transmembrane transporter activity IEP HCCA
MF GO:0015399 primary active transmembrane transporter activity IEP HCCA
CC GO:0016020 membrane IEP HCCA
BP GO:0016052 carbohydrate catabolic process IEP HCCA
BP GO:0016192 vesicle-mediated transport IEP HCCA
MF GO:0016757 glycosyltransferase activity IEP HCCA
MF GO:0016758 hexosyltransferase activity IEP HCCA
BP GO:0019693 ribose phosphate metabolic process IEP HCCA
BP GO:0019752 carboxylic acid metabolic process IEP HCCA
MF GO:0022853 active monoatomic ion transmembrane transporter activity IEP HCCA
CC GO:0030117 membrane coat IEP HCCA
CC GO:0030120 vesicle coat IEP HCCA
CC GO:0030126 COPI vesicle coat IEP HCCA
MF GO:0030955 potassium ion binding IEP HCCA
MF GO:0031369 translation initiation factor binding IEP HCCA
MF GO:0031420 alkali metal ion binding IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
BP GO:0043413 macromolecule glycosylation IEP HCCA
BP GO:0043436 oxoacid metabolic process IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044281 small molecule metabolic process IEP HCCA
MF GO:0045182 translation regulator activity IEP HCCA
BP GO:0046031 ADP metabolic process IEP HCCA
BP GO:0046034 ATP metabolic process IEP HCCA
BP GO:0046939 nucleotide phosphorylation IEP HCCA
BP GO:0070085 glycosylation IEP HCCA
MF GO:0090079 translation regulator activity, nucleic acid binding IEP HCCA
BP GO:1901605 alpha-amino acid metabolic process IEP HCCA
BP GO:1901607 alpha-amino acid biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR002075 NTF2_dom 14 127
No external refs found!