1. Home
  2. Species
  3. Amborella trichopoda
  4. Sequence
  5. AMTR_s00039p00150510

AMTR_s00039p00150510 (GATB,...)


Aliases : GATB, evm_27.TU.AmTr_v1.0_scaffold00039.103

Description : Protein biosynthesis.aminoacyl-tRNA synthetase activities.glutamyl-tRNA-dependent amidotransferase complex.GatB component


Gene families : OG0003791 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003791_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00039p00150510
Cluster HCCA: Cluster_101

Target Alias Description ECC score Gene Family Method Actions
AT1G48520 GATB GLU-ADT subunit B 0.05 OrthoFinder output from all 47 species
Adi_g022222 GATB component *(GatB) of glutamyl-tRNA-dependent... 0.03 OrthoFinder output from all 47 species
Aev_g01284 GATB component *(GatB) of glutamyl-tRNA-dependent... 0.02 OrthoFinder output from all 47 species
Aop_g03519 GATB component *(GatB) of glutamyl-tRNA-dependent... 0.02 OrthoFinder output from all 47 species
Dcu_g32346 GATB component *(GatB) of glutamyl-tRNA-dependent... 0.06 OrthoFinder output from all 47 species
GSVIVT01027937001 GATB Glutamyl-tRNA(Gln) amidotransferase subunit B,... 0.05 OrthoFinder output from all 47 species
GSVIVT01027938001 GATB Protein biosynthesis.aminoacyl-tRNA synthetase... 0.04 OrthoFinder output from all 47 species
Len_g18271 GATB component *(GatB) of glutamyl-tRNA-dependent... 0.03 OrthoFinder output from all 47 species
Lfl_g11055 GATB component *(GatB) of glutamyl-tRNA-dependent... 0.07 OrthoFinder output from all 47 species
MA_6978g0020 GATB component GatB of glutamyl-tRNA-dependent... 0.03 OrthoFinder output from all 47 species
MA_889802g0010 GATB component GatB of glutamyl-tRNA-dependent... 0.04 OrthoFinder output from all 47 species
Mp1g29210.1 GATB component GatB of glutamyl-tRNA-dependent... 0.04 OrthoFinder output from all 47 species
Nbi_g13336 GATB component *(GatB) of glutamyl-tRNA-dependent... 0.03 OrthoFinder output from all 47 species
Pnu_g10579 GATB component *(GatB) of glutamyl-tRNA-dependent... 0.02 OrthoFinder output from all 47 species
Sam_g09704 No alias component *(GatB) of glutamyl-tRNA-dependent... 0.05 OrthoFinder output from all 47 species
Smo120349 GATB Protein biosynthesis.aminoacyl-tRNA synthetase... 0.02 OrthoFinder output from all 47 species
Smo441971 GATB Protein biosynthesis.aminoacyl-tRNA synthetase... 0.02 OrthoFinder output from all 47 species
Solyc09g090840.3.1 GATB, Solyc09g090840 component GatB of glutamyl-tRNA-dependent... 0.05 OrthoFinder output from all 47 species
Spa_g37335 GATB component *(GatB) of glutamyl-tRNA-dependent... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0016874 ligase activity IEA Interproscan
MF GO:0016884 carbon-nitrogen ligase activity, with glutamine as amido-N-donor IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0004222 metalloendopeptidase activity IEP HCCA
MF GO:0008237 metallopeptidase activity IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
InterPro domains Description Start Stop
IPR018027 Asn/Gln_amidotransferase 397 544
IPR006075 Asn/Gln-tRNA_Trfase_suB/E_cat 70 360
No external refs found!