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  5. AMTR_s00039p00037360

AMTR_s00039p00037360 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00039.12

Description : Zinc finger CCCH domain-containing protein 25 OS=Oryza sativa subsp. japonica


Gene families : OG0007393 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0007393_tree

Sequence : coding (download), protein (download)


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Type Description Actions
Neighborhood HRR: AMTR_s00039p00037360

Target Alias Description ECC score Gene Family Method Actions
Cre06.g280550 No alias Zinc finger CCCH domain-containing protein 42... 0.02 OrthoFinder output from all 47 species
LOC_Os03g61110.1 LOC_Os03g61110 Zinc finger CCCH domain-containing protein 25 OS=Oryza... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
MF GO:0008270 zinc ion binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0005381 iron ion transmembrane transporter activity IEP HCCA
MF GO:0005525 GTP binding IEP HCCA
MF GO:0008324 monoatomic cation transmembrane transporter activity IEP HCCA
MF GO:0015075 monoatomic ion transmembrane transporter activity IEP HCCA
MF GO:0015093 ferrous iron transmembrane transporter activity IEP HCCA
MF GO:0015318 inorganic molecular entity transmembrane transporter activity IEP HCCA
MF GO:0019001 guanyl nucleotide binding IEP HCCA
MF GO:0022890 inorganic cation transmembrane transporter activity IEP HCCA
MF GO:0032561 guanyl ribonucleotide binding IEP HCCA
MF GO:0046873 metal ion transmembrane transporter activity IEP HCCA
MF GO:0046915 transition metal ion transmembrane transporter activity IEP HCCA
InterPro domains Description Start Stop
IPR000504 RRM_dom 38 108
IPR000571 Znf_CCCH 132 155
No external refs found!