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  5. AMTR_s00038p00234220

AMTR_s00038p00234220 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00038.234

Description : Haloacid dehalogenase-like hydrolase domain-containing protein At4g39970 OS=Arabidopsis thaliana


Gene families : OG0005580 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005580_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00038p00234220
Cluster HCCA: Cluster_101

Target Alias Description ECC score Gene Family Method Actions
AT4G39970 No alias Haloacid dehalogenase-like hydrolase (HAD) superfamily protein 0.07 OrthoFinder output from all 47 species
Aev_g02090 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g10212 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g11324 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g27493 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ceric.13G097400.1 Ceric.13G097400 not classified & original description: pacid=50635210... 0.04 OrthoFinder output from all 47 species
Cpa|evm.model.tig00021037.8 No alias Photosynthesis.calvin cycle.ribulose-1,5-bisphosphat... 0.03 OrthoFinder output from all 47 species
Cre14.g623000 No alias Haloacid dehalogenase-like hydrolase domain-containing... 0.03 OrthoFinder output from all 47 species
Cre16.g656650 No alias Haloacid dehalogenase-like hydrolase domain-containing... 0.03 OrthoFinder output from all 47 species
Dcu_g08052 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g02050 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01006627001 No alias Haloacid dehalogenase-like hydrolase domain-containing... 0.07 OrthoFinder output from all 47 species
Gb_32746 No alias Haloacid dehalogenase-like hydrolase domain-containing... 0.04 OrthoFinder output from all 47 species
LOC_Os08g37940.1 LOC_Os08g37940 Haloacid dehalogenase-like hydrolase domain-containing... 0.02 OrthoFinder output from all 47 species
Len_g11758 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Lfl_g11213 No alias not classified & original description: none 0.09 OrthoFinder output from all 47 species
MA_137202g0010 No alias Haloacid dehalogenase-like hydrolase domain-containing... 0.03 OrthoFinder output from all 47 species
Msp_g07526 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g38946 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g32919 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Pir_g65559 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pnu_g27487 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g46600 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Smo447828 No alias Haloacid dehalogenase-like hydrolase domain-containing... 0.06 OrthoFinder output from all 47 species
Solyc11g009020.2.1 Solyc11g009020 Haloacid dehalogenase-like hydrolase domain-containing... 0.05 OrthoFinder output from all 47 species
Spa_g10420 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Zm00001e006565_P001 Zm00001e006565 Haloacid dehalogenase-like hydrolase domain-containing... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000154 rRNA modification IEP HCCA
BP GO:0001510 RNA methylation IEP HCCA
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP HCCA
MF GO:0004659 prenyltransferase activity IEP HCCA
MF GO:0005525 GTP binding IEP HCCA
BP GO:0006364 rRNA processing IEP HCCA
BP GO:0006457 protein folding IEP HCCA
BP GO:0009451 RNA modification IEP HCCA
BP GO:0016072 rRNA metabolic process IEP HCCA
MF GO:0016765 transferase activity, transferring alkyl or aryl (other than methyl) groups IEP HCCA
MF GO:0016859 cis-trans isomerase activity IEP HCCA
MF GO:0019001 guanyl nucleotide binding IEP HCCA
BP GO:0031167 rRNA methylation IEP HCCA
BP GO:0032259 methylation IEP HCCA
MF GO:0032561 guanyl ribonucleotide binding IEP HCCA
BP GO:0034470 ncRNA processing IEP HCCA
BP GO:0043414 macromolecule methylation IEP HCCA
MF GO:0050660 flavin adenine dinucleotide binding IEP HCCA
InterPro domains Description Start Stop
IPR023214 HAD_sf 72 281
No external refs found!