Sequence Description Alias PCC hrr AMTR_s00001p00220750 evm_27.TU.AmTr_v1.0_scaffold00001.229 0.932057164877922 21 AMTR_s00044p00116170 Protein modification.protein folding and quality control.protein folding catalyst activities.FKBP protein folding catalyst evm_27.TU.AmTr_v1.0_scaffold00044.90 0.928384276575769 2 AMTR_s00061p00050140 evm_27.TU.AmTr_v1.0_scaffold00061.26 0.9273165509302808 4 AMTR_s00062p00065360 Photosynthesis.photophosphorylation.photosystem II.photoprotection.non-photochemical quenching (NPQ).LCNP NPQ-regulator lipocalin CHL, evm_27.TU.AmTr_v1.0_scaffold00062.38 0.9221811162119429 5 AMTR_s00003p00257280 Protein modification.protein folding and quality control.protein folding catalyst activities.Cyclophilin protein folding catalyst evm_27.TU.AmTr_v1.0_scaffold00003.320 0.9219572098117553 27 AMTR_s00022p00249930 emb2738, evm_27.TU.AmTr_v1.0_scaffold00022.381 0.921614430353061 22 AMTR_s00010p00259870 evm_27.TU.AmTr_v1.0_scaffold00010.430 0.9207200595328117 21 AMTR_s00007p00156370 Coenzyme metabolism.tetrapyrrol biosynthesis.chlorophyll metabolism.chlorophyll(ide) interconversions.chlorophyll synthase ChlG CHLG, G4, ATG4, evm_27.TU.AmTr_v1.0_scaffold00007.117 0.9201970961683668 11 AMTR_s00065p00038950 evm_27.TU.AmTr_v1.0_scaffold00065.17 0.9197249755068374 21 AMTR_s00008p00202090 RNA-binding protein CP33, chloroplastic OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00008.120 0.9139037498773969 13 AMTR_s00101p00041820 evm_27.TU.AmTr_v1.0_scaffold00101.13 0.9117230611885284 19 AMTR_s00046p00228230 Protein biosynthesis.organelle translation machineries.plastidial ribosome.large subunit proteome.psRPL13 component emb1473, evm_27.TU.AmTr_v1.0_scaffold00046.169 0.910810860932245 47 AMTR_s00052p00157970 evm_27.TU.AmTr_v1.0_scaffold00052.66 0.9098270974822135 27 AMTR_s00028p00245370 RNA processing.organelle machineries.RNA splicing.plastidial RNA splicing.CFM2-type splicing factor ATCFM2, CFM2, evm_27.TU.AmTr_v1.0_scaffold00028.138 0.9076461172962549 52 AMTR_s00045p00116920 Protein translocation.chloroplast.thylakoid membrane Sec1 translocation system.SecA1 component SECA1, AtcpSecA, AGY1, evm_27.TU.AmTr_v1.0_scaffold00045.113 0.9066239726162472 54 AMTR_s00120p00054610 evm_27.TU.AmTr_v1.0_scaffold00120.17 0.9065215393066953 21 AMTR_s00010p00259680 Protein degradation.peptidase families.serine-type peptidase activities.Deg protease DEGP8, DEG8, evm_27.TU.AmTr_v1.0_scaffold00010.427 0.9054263783974109 17 AMTR_s00048p00223180 Protein biosynthesis.aminoacyl-tRNA synthetase activities.serine-tRNA ligase ATSRS, OVA7, SRS, evm_27.TU.AmTr_v1.0_scaffold00048.210 0.9053510931003989 36 AMTR_s00136p00085920 Pentatricopeptide repeat-containing protein At1g10910, chloroplastic OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00136.44 0.9044251444429028 61 AMTR_s00010p00207700 evm_27.TU.AmTr_v1.0_scaffold00010.200 0.9043803734974891 20 AMTR_s00058p00171240 evm_27.TU.AmTr_v1.0_scaffold00058.156 0.9038716730591398 91 AMTR_s00023p00232870 Pentatricopeptide repeat-containing protein At5g02830, chloroplastic OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00023.190 0.9015136403602886 38 AMTR_s00006p00260480 External stimuli response.temperature.Hsp (heat-shock-responsive protein) families.Hsp60 family.Hsp60 protein evm_27.TU.AmTr_v1.0_scaffold00006.222 0.9010554062681754 33 AMTR_s00131p00066980 30S ribosomal protein S1, chloroplastic OS=Spinacia oleracea evm_27.TU.AmTr_v1.0_scaffold00131.39 0.899985651942001 43 AMTR_s00029p00114850 evm_27.TU.AmTr_v1.0_scaffold00029.125 0.8997955387857552 52 AMTR_s00057p00193080 Protein biosynthesis.organelle translation machineries.translation termination.PrfA-type peptide chain release factor APG3, evm_27.TU.AmTr_v1.0_scaffold00057.217 0.8991352946362381 48 AMTR_s00010p00237980 Protein modification.phosphorylation.atypical kinase families.ABC1 kinase ATATH13, OSA1, ATH13, ATOSA1, evm_27.TU.AmTr_v1.0_scaffold00010.293 0.8986132039806596 93 AMTR_s00071p00199450 Solute transport.primary active transport.ABC superfamily.ABC1 family.subfamily ABCD transporter evm_27.TU.AmTr_v1.0_scaffold00071.217 0.8973815941837071 79 AMTR_s00001p00253330 evm_27.TU.AmTr_v1.0_scaffold00001.328 0.8970277382240676 73 AMTR_s00013p00233820 evm_27.TU.AmTr_v1.0_scaffold00013.185 0.8956826991212145 30 AMTR_s00049p00107230 evm_27.TU.AmTr_v1.0_scaffold00049.81 0.895117290680826 85 AMTR_s00031p00061040 Uncharacterized protein At5g03900, chloroplastic OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00031.26 0.8935690552232347 54 AMTR_s00010p00055110 Protein biosynthesis.organelle translation machineries.plastidial ribosome.small subunit proteome.psPSRP3 component evm_27.TU.AmTr_v1.0_scaffold00010.27 0.892486020286186 52 AMTR_s00106p00046740 Protein biosynthesis.aminoacyl-tRNA synthetase activities.leucine-tRNA ligase EMB2369, evm_27.TU.AmTr_v1.0_scaffold00106.25 0.8920999406910358 72 AMTR_s00058p00093170 evm_27.TU.AmTr_v1.0_scaffold00058.50 0.8916145050701958 55 AMTR_s00089p00093330 Protein biosynthesis.aminoacyl-tRNA synthetase activities.lysine-tRNA ligase OVA5, ATKRS-2, evm_27.TU.AmTr_v1.0_scaffold00089.48 0.890278332253129 47 AMTR_s00044p00143330 Photosynthesis.photophosphorylation.photosystem II.assembly and maintenance.LPA3 protein LPA3, evm_27.TU.AmTr_v1.0_scaffold00044.141 0.890003567721366 76 AMTR_s00075p00091010 Coenzyme metabolism.tetrapyrrol biosynthesis.protoporphyrin IX formation.uroporphyrinogen III decarboxylase HEME1, evm_27.TU.AmTr_v1.0_scaffold00075.28 0.8897094209735682 47 AMTR_s00029p00240470 Protein WEAK CHLOROPLAST MOVEMENT UNDER BLUE LIGHT-like 1 OS=Arabidopsis thaliana WEB1, evm_27.TU.AmTr_v1.0_scaffold00029.410 0.8892471715260764 82 AMTR_s00061p00169610 Protein modification.protein folding and quality control.protein folding catalyst activities.FKBP protein folding catalyst evm_27.TU.AmTr_v1.0_scaffold00061.177 0.8885778471533935 42 AMTR_s00046p00014960 Rhodanese-like domain-containing protein 9, chloroplastic OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00046.2 0.8864602052475212 65 AMTR_s00002p00128010 RNA biosynthesis.organelle machineries.RNA polymerase activities.plastid-encoded RNA polymerase (PEP) complex.essentiell co-factors.PAP9/FSD2 component FSD2, evm_27.TU.AmTr_v1.0_scaffold00002.85 0.8860636089725967 44 AMTR_s00175p00037000 Protein modification.phosphorylation.atypical kinase families.ABC1 kinase ATATH8, evm_27.TU.AmTr_v1.0_scaffold00175.11 0.8859173645460663 90 AMTR_s00109p00045690 Pentatricopeptide repeat-containing protein At5g25630 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00109.32 0.8857878821598792 83 AMTR_s00050p00032750 evm_27.TU.AmTr_v1.0_scaffold00050.4 0.8839741079494292 49 AMTR_s00044p00032580 RNA biosynthesis.organelle machineries.RNA polymerase activities.plastid-encoded RNA polymerase (PEP) complex.essentiell co-factors.PAP4/FSD3 component FSD3, evm_27.TU.AmTr_v1.0_scaffold00044.9 0.883839642507531 75 AMTR_s00046p00214930 Pentatricopeptide repeat-containing protein At1g11290, chloroplastic OS=Arabidopsis thaliana CRR22, evm_27.TU.AmTr_v1.0_scaffold00046.141 0.8837514076284476 73 AMTR_s00145p00079180 Photosynthesis.photophosphorylation.chlororespiration.NADH dehydrogenase-like (NDH) complex.lumen subcomplex L.PnsL1 component PPL2, evm_27.TU.AmTr_v1.0_scaffold00145.28 0.8819658444448246 53 AMTR_s00018p00168540 DNA mismatch repair protein MSH1, mitochondrial OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00018.94 0.8817920855610055 81 AMTR_s00025p00248100 Probable transmembrane GTPase FZO-like, chloroplastic OS=Arabidopsis thaliana FZL, evm_27.TU.AmTr_v1.0_scaffold00025.402 0.8815884362224662 56 AMTR_s00048p00222810 evm_27.TU.AmTr_v1.0_scaffold00048.208 0.8815045341700499 56 AMTR_s00053p00152680 Coenzyme metabolism.tetrapyrrol biosynthesis.chlorophyll metabolism.magnesium-chelatase complex.CHL-D component V157, PDE166, ALB1, CHLD, ALB-1V, evm_27.TU.AmTr_v1.0_scaffold00053.100 0.8811960401864608 70 AMTR_s00147p00104660 evm_27.TU.AmTr_v1.0_scaffold00147.61 0.8811762598196757 58 AMTR_s00015p00257490 Photosynthesis.photophosphorylation.linear electron flow.ferredoxin-NADP reductase (FNR) activity.FNR membrane-tethering.TROL protein TROL, evm_27.TU.AmTr_v1.0_scaffold00015.112 0.8808993788555642 65 AMTR_s00006p00258450 Coenzyme metabolism.phylloquinone synthesis.multifunctional phylloquinone synthesis protein (PHYLLO) evm_27.TU.AmTr_v1.0_scaffold00006.206 0.8800877932123252 68 AMTR_s00176p00057350 Solute transport.primary active transport.P-type ATPase superfamily.P1 family.HMA P1B-type heavy metal cation-transporting ATPase PAA1, HMA6, evm_27.TU.AmTr_v1.0_scaffold00176.30 0.8785898597789944 63 AMTR_s00057p00143260 Protein degradation.peptidase families.serine-type peptidase activities.Deg protease DEGP2, evm_27.TU.AmTr_v1.0_scaffold00057.128 0.8783706306472508 93 AMTR_s00058p00167600 Protein modification.protein folding and quality control.protein folding catalyst activities.Cyclophilin protein folding catalyst ATCYP38, CYP38, evm_27.TU.AmTr_v1.0_scaffold00058.152 0.8779396614043589 74 AMTR_s00153p00036670 Lipid metabolism.galactolipid and sulfolipid synthesis.plastidial UDP-glucose pyrophosphorylase UGP3, evm_27.TU.AmTr_v1.0_scaffold00153.14 0.8769068136251533 71 AMTR_s00133p00054340 PsbP domain-containing protein 3, chloroplastic OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00133.19 0.875944545051753 71 AMTR_s00032p00226710 Coenzyme metabolism.tetrapyrrol biosynthesis.protoporphyrin IX formation.coproporphyrinogen III oxidase activities.HemF oxygen-dependent coproporphyrinogen III oxidase ATCPO-I, LIN2, HEMF1, evm_27.TU.AmTr_v1.0_scaffold00032.243 0.8758410634234265 72 AMTR_s00110p00125590 Carbohydrate metabolism.starch metabolism.degradation.hydrolysis and phosphorolysis.amylase activities.alpha amylase AMY3, ATAMY3, evm_27.TU.AmTr_v1.0_scaffold00110.101 0.8755038089006602 73 AMTR_s00024p00252900 Photosynthesis.photophosphorylation.photosystem II.photosynthetic acclimation.MPH2 acclimation factor evm_27.TU.AmTr_v1.0_scaffold00024.352 0.8752384351997248 74 AMTR_s00077p00134480 Protein modification.phosphorylation.CMGC kinase superfamily.STN kinase STN8, evm_27.TU.AmTr_v1.0_scaffold00077.129 0.8752161512227847 94 AMTR_s00061p00142700 RNA processing.organelle machineries.RNA editing.plastidial RNA editing.CP31 RNA editing factor ATRBP31, CP31, ATRBP33, RBP31, evm_27.TU.AmTr_v1.0_scaffold00061.123 0.8752099416195072 76 AMTR_s00009p00265580 DNA mismatch repair protein MSH3 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00009.383 0.8750609512429973 90 AMTR_s00077p00156540 Serotonin N-acetyltransferase 1, chloroplastic OS=Oryza sativa subsp. japonica ATNSI, NSI, evm_27.TU.AmTr_v1.0_scaffold00077.160 0.8747475291357804 78 AMTR_s00103p00070570 Protein biosynthesis.organelle translation machineries.translation termination.RRF ribosome recycling factor AtcpRRF, HFP108, cpRRF, RRF, evm_27.TU.AmTr_v1.0_scaffold00103.36 0.8745619597555366 82 AMTR_s00057p00182930 evm_27.TU.AmTr_v1.0_scaffold00057.195 0.8743817264438308 80 AMTR_s00027p00090460 Embryogenesis-associated protein EMB8 OS=Picea glauca evm_27.TU.AmTr_v1.0_scaffold00027.29 0.8739647859167888 81 AMTR_s00005p00062400 RNA biosynthesis.organelle machineries.RNA polymerase activities.plastid-encoded RNA polymerase (PEP) complex.regulatory co-factors.PRDA1 FSD2-interacting factor evm_27.TU.AmTr_v1.0_scaffold00005.9 0.8738574287519657 82 AMTR_s00092p00149880 Uncharacterized oxidoreductase At1g06690, chloroplastic OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00092.118 0.8737862367652004 83 AMTR_s00171p00047960 evm_27.TU.AmTr_v1.0_scaffold00171.29 0.8730274712844582 86 AMTR_s00148p00069790 Protein modification.phosphorylation.TKL kinase superfamily.RLCK-VIII kinase families.RLCK-VIII-sis kinase NCRK, evm_27.TU.AmTr_v1.0_scaffold00148.43 0.8730259810285874 87 AMTR_s00010p00267610 Photosynthesis.calvin cycle.ribulose-1,5-bisphosphat carboxylase/oxygenase (RuBisCo) activity.regulation.lysine N-methyltransferase evm_27.TU.AmTr_v1.0_scaffold00010.540 0.8718889864526714 92 AMTR_s00029p00083110 Photosynthesis.photophosphorylation.photosystem II.assembly and maintenance.HCF136 protein HCF136, evm_27.TU.AmTr_v1.0_scaffold00029.76 0.8714351356652529 93 AMTR_s00099p00159350 Coenzyme metabolism.tetrapyrrol biosynthesis.chlorophyll metabolism.chlorophyll breakdown.chlorophyll dephytylase (CLD) evm_27.TU.AmTr_v1.0_scaffold00099.158 0.8710184461060778 95