Aliases : NRPB3, RPB35.5A, RBP36A, NRPD3, NRPE3A, evm_27.TU.AmTr_v1.0_scaffold00038.139
Description : RNA biosynthesis.DNA-dependent RNA polymerase (Pol) complexes.regulatory subunits.subunit 3
Gene families : OG0005241 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005241_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
Solyc05g010300.4.1 | NRPB3, RPB35.5A,... | subunit 3 of RNA polymerase | 0.03 | OrthoFinder output from all 47 species | |
Tin_g02583 | NRPB3, RPB35.5A,... | component *(NRPE3) of RNA polymerase V complex &... | 0.02 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003899 | DNA-directed 5'-3' RNA polymerase activity | IEA | Interproscan |
BP | GO:0006351 | DNA-templated transcription | IEA | Interproscan |
MF | GO:0046983 | protein dimerization activity | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0005048 | signal sequence binding | IEP | HCCA |
BP | GO:0006396 | RNA processing | IEP | HCCA |
BP | GO:0006397 | mRNA processing | IEP | HCCA |
BP | GO:0006621 | protein retention in ER lumen | IEP | HCCA |
BP | GO:0016071 | mRNA metabolic process | IEP | HCCA |
BP | GO:0032507 | maintenance of protein location in cell | IEP | HCCA |
MF | GO:0033218 | amide binding | IEP | HCCA |
BP | GO:0035437 | maintenance of protein localization in endoplasmic reticulum | IEP | HCCA |
MF | GO:0042277 | peptide binding | IEP | HCCA |
BP | GO:0045185 | maintenance of protein location | IEP | HCCA |
MF | GO:0046923 | ER retention sequence binding | IEP | HCCA |
BP | GO:0051179 | localization | IEP | HCCA |
BP | GO:0051235 | maintenance of location | IEP | HCCA |
BP | GO:0051651 | maintenance of location in cell | IEP | HCCA |
BP | GO:0072595 | maintenance of protein localization in organelle | IEP | HCCA |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR011262 | DNA-dir_RNA_pol_insert | 53 | 184 |
No external refs found! |