Aliases : HY4, ATCRY1, BLU1, OOP2, CRY1, evm_27.TU.AmTr_v1.0_scaffold00038.124
Description : External stimuli response.light.UV-A/blue light.cryptochrome-mediated photoperception.CRY cryptochrome photoreceptor
Gene families : OG0000814 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000814_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: AMTR_s00038p00182380 | |
Cluster | HCCA: Cluster_56 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AT4G08920 | HY4, ATCRY1,... | cryptochrome 1 | 0.04 | OrthoFinder output from all 47 species | |
Als_g46007 | HY4, ATCRY1,... | cryptochrome photoreceptor *(CRY) & original description: none | 0.01 | OrthoFinder output from all 47 species | |
Aop_g11870 | HY4, ATCRY1,... | cryptochrome photoreceptor *(CRY) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Aspi01Gene33736.t1 | HY4, ATCRY1,... | cryptochrome photoreceptor *(CRY) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Cba_g01136 | HY4, ATCRY1,... | cryptochrome photoreceptor *(CRY) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Cpa|evm.model.tig00021579.19 | ATCRY2, CRY2,... | Cryptochrome-1 OS=Arabidopsis thaliana | 0.01 | OrthoFinder output from all 47 species | |
Dac_g09706 | HY4, ATCRY1,... | cryptochrome photoreceptor *(CRY) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Dcu_g09253 | HY4, ATCRY1,... | cryptochrome photoreceptor *(CRY) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Ehy_g02909 | HY4, ATCRY1,... | cryptochrome photoreceptor *(CRY) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
GSVIVT01009033001 | HY4, ATCRY1,... | External stimuli response.light.UV-A/blue... | 0.05 | OrthoFinder output from all 47 species | |
LOC_Os02g36380.1 | HY4, ATCRY1,... | cryptochrome photoreceptor (CRY) | 0.05 | OrthoFinder output from all 47 species | |
LOC_Os04g37920.1 | HY4, ATCRY1,... | cryptochrome photoreceptor (CRY) | 0.02 | OrthoFinder output from all 47 species | |
Len_g02360 | HY4, ATCRY1,... | cryptochrome photoreceptor *(CRY) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Solyc12g057040.2.1 | HY4, ATCRY1,... | cryptochrome photoreceptor (CRY) | 0.02 | OrthoFinder output from all 47 species | |
Spa_g32030 | HY4, ATCRY1,... | cryptochrome photoreceptor *(CRY) & original description: none | 0.02 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003913 | DNA photolyase activity | IEA | Interproscan |
BP | GO:0006281 | DNA repair | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0004096 | catalase activity | IEP | HCCA |
MF | GO:0004601 | peroxidase activity | IEP | HCCA |
MF | GO:0005506 | iron ion binding | IEP | HCCA |
BP | GO:0006352 | DNA-templated transcription initiation | IEP | HCCA |
MF | GO:0009055 | electron transfer activity | IEP | HCCA |
BP | GO:0015979 | photosynthesis | IEP | HCCA |
MF | GO:0016209 | antioxidant activity | IEP | HCCA |
MF | GO:0016491 | oxidoreductase activity | IEP | HCCA |
MF | GO:0016684 | oxidoreductase activity, acting on peroxide as acceptor | IEP | HCCA |
MF | GO:0016705 | oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen | IEP | HCCA |
MF | GO:0016987 | sigma factor activity | IEP | HCCA |
MF | GO:0020037 | heme binding | IEP | HCCA |
MF | GO:0043169 | cation binding | IEP | HCCA |
MF | GO:0046872 | metal ion binding | IEP | HCCA |
MF | GO:0046906 | tetrapyrrole binding | IEP | HCCA |
MF | GO:0046914 | transition metal ion binding | IEP | HCCA |
BP | GO:0055114 | obsolete oxidation-reduction process | IEP | HCCA |
MF | GO:0097159 | organic cyclic compound binding | IEP | HCCA |
MF | GO:1901363 | heterocyclic compound binding | IEP | HCCA |
No external refs found! |