AMTR_s00038p00151410 (evm_27.TU.AmTr_v1.0_sc...)

Aliases : evm_27.TU.AmTr_v1.0_scaffold00038.92

Description : Protein translocation.nucleus.nucleocytoplasmic transport.karyopherin beta transport receptors.XPO7 export karyopherin

Gene families : OG0003435 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003435_tree

Sequence : coding (download), protein (download)

Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AMTR_s00038p00151410

Target	Alias	Description	ECC score	Gene Family Method
AT5G06120	No alias	ARM repeat superfamily protein	0.03	OrthoFinder output from all 47 species
Aev_g19538	No alias	nucleocytoplasmic export karyopherin *(XPO7) & original...	0.02	OrthoFinder output from all 47 species
Aspi01Gene58037.t1	Aspi01Gene58037	nucleocytoplasmic export karyopherin *(XPO7) & original...	0.04	OrthoFinder output from all 47 species
Aspi01Gene58038.t1	Aspi01Gene58038	nucleocytoplasmic export karyopherin *(XPO7) & original...	0.03	OrthoFinder output from all 47 species
Aspi01Gene58039.t1	Aspi01Gene58039	nucleocytoplasmic export karyopherin *(XPO7) & original...	0.06	OrthoFinder output from all 47 species
Ceric.1Z302800.1	Ceric.1Z302800	nucleocytoplasmic export karyopherin *(XPO7) & original...	0.03	OrthoFinder output from all 47 species
Ceric.31G023600.1	Ceric.31G023600	nucleocytoplasmic export karyopherin *(XPO7) & original...	0.04	OrthoFinder output from all 47 species
Dcu_g05803	No alias	nucleocytoplasmic export karyopherin *(XPO7) & original...	0.06	OrthoFinder output from all 47 species
Dde_g00951	No alias	nucleocytoplasmic export karyopherin *(XPO7) & original...	0.05	OrthoFinder output from all 47 species
GSVIVT01012453001	No alias	Protein translocation.nucleus.nucleocytoplasmic...	0.04	OrthoFinder output from all 47 species
LOC_Os03g42050.1	LOC_Os03g42050	XPO7 nucleocytoplasmic export karyopherin	0.06	OrthoFinder output from all 47 species
Lfl_g05013	No alias	nucleocytoplasmic export karyopherin *(XPO7) & original...	0.08	OrthoFinder output from all 47 species
MA_10427428g0010	No alias	XPO7 nucleocytoplasmic export karyopherin	0.03	OrthoFinder output from all 47 species
MA_20559g0010	No alias	XPO7 nucleocytoplasmic export karyopherin	0.04	OrthoFinder output from all 47 species
Nbi_g02474	No alias	nucleocytoplasmic export karyopherin *(XPO7) & original...	0.03	OrthoFinder output from all 47 species
Pir_g09812	No alias	nucleocytoplasmic export karyopherin *(XPO7) & original...	0.03	OrthoFinder output from all 47 species
Pnu_g07477	No alias	nucleocytoplasmic export karyopherin *(XPO7) & original...	0.03	OrthoFinder output from all 47 species
Ppi_g13500	No alias	nucleocytoplasmic export karyopherin *(XPO7) & original...	0.03	OrthoFinder output from all 47 species
Sam_g50433	No alias	nucleocytoplasmic export karyopherin *(XPO7) & original...	0.02	OrthoFinder output from all 47 species
Solyc01g056520.3.1	Solyc01g056520	XPO7 nucleocytoplasmic export karyopherin	0.03	OrthoFinder output from all 47 species
Tin_g25648	No alias	nucleocytoplasmic export karyopherin *(XPO7) & original...	0.02	OrthoFinder output from all 47 species
Zm00001e030757_P004	Zm00001e030757	XPO7 nucleocytoplasmic export karyopherin	0.06	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005643	nuclear pore	IEA	Interproscan
BP	GO:0006810	transport	None	Extended
BP	GO:0006886	intracellular protein transport	IEA	Interproscan
BP	GO:0008104	protein localization	None	Extended
BP	GO:0008150	biological_process	None	Extended
MF	GO:0008565	obsolete protein transporter activity	IEA	Interproscan
BP	GO:0009987	cellular process	None	Extended
BP	GO:0015031	protein transport	None	Extended
CC	GO:0032991	protein-containing complex	None	Extended
BP	GO:0033036	macromolecule localization	None	Extended
BP	GO:0045184	establishment of protein localization	None	Extended
BP	GO:0046907	intracellular transport	None	Extended
BP	GO:0051179	localization	None	Extended
BP	GO:0051234	establishment of localization	None	Extended
BP	GO:0051641	cellular localization	None	Extended
BP	GO:0051649	establishment of localization in cell	None	Extended
BP	GO:0070727	cellular macromolecule localization	None	Extended
BP	GO:0071702	organic substance transport	None	Extended
BP	GO:0071705	nitrogen compound transport	None	Extended
CC	GO:0140513	nuclear protein-containing complex	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
BP	GO:0009966	regulation of signal transduction	IEP	HCCA
BP	GO:0010646	regulation of cell communication	IEP	HCCA
BP	GO:0023051	regulation of signaling	IEP	HCCA
BP	GO:0032012	regulation of ARF protein signal transduction	IEP	HCCA
BP	GO:0046578	regulation of Ras protein signal transduction	IEP	HCCA
BP	GO:0048583	regulation of response to stimulus	IEP	HCCA
BP	GO:0051056	regulation of small GTPase mediated signal transduction	IEP	HCCA
BP	GO:1902531	regulation of intracellular signal transduction	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR001494	Importin-beta_N	26	89

External Links

No external refs found!

AMTR_s00038p00151410 (evm_27.TU.AmTr_v1.0_sc...)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation