AMTR_s00037p00085580 (evm_27.TU.AmTr_v1.0_sc...)

Aliases : evm_27.TU.AmTr_v1.0_scaffold00037.30

Description : Reactive Intermediate Deaminase A, chloroplastic OS=Arabidopsis thaliana

Gene families : OG0002915 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002915_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AMTR_s00037p00085580

Target	Alias	Description	ECC score	Gene Family Method
Cpa\|evm.model.tig00000681.15	No alias	No description available	0.02	OrthoFinder output from all 47 species
Cpa\|evm.model.tig00020780.12	No alias	Reactive Intermediate Deaminase A, chloroplastic...	0.01	OrthoFinder output from all 47 species
Mp8g13850.1	No alias	Reactive Intermediate Deaminase A, chloroplastic...	0.03	OrthoFinder output from all 47 species
Sam_g10777	No alias	threonine reactive imine intermediate deaminase *(RidA)...	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
No GO annotation available for this sequence

Type	GO Term	Name	Evidence	Source
MF	GO:0003729	mRNA binding	IEP	HCCA
CC	GO:0005849	mRNA cleavage factor complex	IEP	HCCA
BP	GO:0006378	mRNA polyadenylation	IEP	HCCA
BP	GO:0006396	RNA processing	IEP	HCCA
BP	GO:0006397	mRNA processing	IEP	HCCA
BP	GO:0016071	mRNA metabolic process	IEP	HCCA
MF	GO:0016667	oxidoreductase activity, acting on a sulfur group of donors	IEP	HCCA
MF	GO:0016671	oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor	IEP	HCCA
BP	GO:0031123	RNA 3'-end processing	IEP	HCCA
BP	GO:0031124	mRNA 3'-end processing	IEP	HCCA
MF	GO:0033743	peptide-methionine (R)-S-oxide reductase activity	IEP	HCCA
BP	GO:0043631	RNA polyadenylation	IEP	HCCA
CC	GO:0140513	nuclear protein-containing complex	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR006175	YjgF/YER057c/UK114	88	177

External Links

No external refs found!