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  5. AMTR_s00036p00192600

AMTR_s00036p00192600 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00036.105

Description : Enzyme classification.EC_2 transferases.EC_2.1 transferase transferring one-carbon group


Gene families : OG0006052 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0006052_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00036p00192600

Target Alias Description ECC score Gene Family Method Actions
Azfi_s0007.g010857 No alias EC_2.1 transferase transferring one-carbon group &... 0.04 OrthoFinder output from all 47 species
Cre12.g501100 No alias Enzyme classification.EC_2 transferases.EC_2.1... 0.02 OrthoFinder output from all 47 species
LOC_Os01g09750.2 LOC_Os01g09750 Enzyme classification.EC_2 transferases.EC_2.1... 0.03 OrthoFinder output from all 47 species
Pnu_g13774 No alias EC_2.1 transferase transferring one-carbon group &... 0.03 OrthoFinder output from all 47 species
Zm00001e016567_P003 Zm00001e016567 Enzyme classification.EC_2 transferases.EC_2.1... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0006396 RNA processing IEA Interproscan
MF GO:0008173 RNA methyltransferase activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003690 double-stranded DNA binding IEP HCCA
MF GO:0004221 obsolete ubiquitin thiolesterase activity IEP HCCA
MF GO:0004222 metalloendopeptidase activity IEP HCCA
MF GO:0004518 nuclease activity IEP HCCA
MF GO:0004540 ribonuclease activity IEP HCCA
MF GO:0005488 binding IEP HCCA
BP GO:0006281 DNA repair IEP HCCA
BP GO:0006298 mismatch repair IEP HCCA
BP GO:0006508 proteolysis IEP HCCA
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP HCCA
BP GO:0006974 cellular response to DNA damage stimulus IEP HCCA
BP GO:0008033 tRNA processing IEP HCCA
MF GO:0008237 metallopeptidase activity IEP HCCA
BP GO:0016073 snRNA metabolic process IEP HCCA
BP GO:0016180 snRNA processing IEP HCCA
MF GO:0016597 amino acid binding IEP HCCA
MF GO:0016743 carboxyl- or carbamoyltransferase activity IEP HCCA
MF GO:0016763 pentosyltransferase activity IEP HCCA
BP GO:0019941 modification-dependent protein catabolic process IEP HCCA
MF GO:0030983 mismatched DNA binding IEP HCCA
BP GO:0031123 RNA 3'-end processing IEP HCCA
BP GO:0033554 cellular response to stress IEP HCCA
BP GO:0034470 ncRNA processing IEP HCCA
BP GO:0034472 snRNA 3'-end processing IEP HCCA
BP GO:0034477 U6 snRNA 3'-end processing IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0043177 organic acid binding IEP HCCA
BP GO:0043632 modification-dependent macromolecule catabolic process IEP HCCA
BP GO:0044260 cellular macromolecule metabolic process IEP HCCA
MF GO:0050660 flavin adenine dinucleotide binding IEP HCCA
BP GO:0051603 proteolysis involved in protein catabolic process IEP HCCA
BP GO:0051716 cellular response to stimulus IEP HCCA
InterPro domains Description Start Stop
IPR010280 U5_MeTrfase_fam 352 541
No external refs found!