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  5. AMTR_s00034p00232170

AMTR_s00034p00232170 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00034.111

No description available


Gene families : OG0011373 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0011373_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00034p00232170
Cluster HCCA: Cluster_58

Target Alias Description ECC score Gene Family Method Actions
AT5G02640 No alias unknown protein; BEST Arabidopsis thaliana protein match... 0.09 OrthoFinder output from all 47 species
LOC_Os05g02900.1 LOC_Os05g02900 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Zm00001e029547_P001 Zm00001e029547 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004190 aspartic-type endopeptidase activity IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
MF GO:0030247 polysaccharide binding IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
MF GO:0045735 nutrient reservoir activity IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
MF GO:0070001 aspartic-type peptidase activity IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA

No InterPro domains available for this sequence

No external refs found!