Aliases : evm_27.TU.AmTr_v1.0_scaffold00033.265
Description : Reticulon-like protein B6 OS=Arabidopsis thaliana
Gene families : OG0000272 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000272_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: AMTR_s00033p00243500 | |
Cluster | HCCA: Cluster_75 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AT2G23640 | RTNLB13 | Reticulan like protein B13 | 0.06 | OrthoFinder output from all 47 species | |
Ala_g24666 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Aop_g69441 | No alias | ER-tubule curvature-inducing protein *(Reticulon) &... | 0.02 | OrthoFinder output from all 47 species | |
Azfi_s0037.g026028 | RTNLB2, BTI2 | ER-tubule curvature-inducing protein *(Reticulon) &... | 0.04 | OrthoFinder output from all 47 species | |
Ceric.21G036700.1 | Ceric.21G036700 | not classified & original description: pacid=50604177... | 0.04 | OrthoFinder output from all 47 species | |
Cre06.g308950 | No alias | No description available | 0.01 | OrthoFinder output from all 47 species | |
Dac_g05550 | No alias | ER-tubule curvature-inducing protein *(Reticulon) &... | 0.02 | OrthoFinder output from all 47 species | |
Dcu_g38933 | No alias | ER-tubule curvature-inducing protein *(Reticulon) &... | 0.02 | OrthoFinder output from all 47 species | |
GSVIVT01005053001 | RTNLB13 | Reticulon-like protein B13 OS=Arabidopsis thaliana | 0.07 | OrthoFinder output from all 47 species | |
Lfl_g27940 | RTNLB2, BTI2 | ER-tubule curvature-inducing protein *(Reticulon) &... | 0.03 | OrthoFinder output from all 47 species | |
Msp_g26217 | RTNLB2, BTI2 | ER-tubule curvature-inducing protein *(Reticulon) &... | 0.02 | OrthoFinder output from all 47 species | |
Pir_g02191 | No alias | ER-tubule curvature-inducing protein *(Reticulon) &... | 0.02 | OrthoFinder output from all 47 species | |
Ppi_g03668 | RTNLB2, BTI2 | ER-tubule curvature-inducing protein *(Reticulon) &... | 0.02 | OrthoFinder output from all 47 species | |
Solyc02g090370.4.1 | Solyc02g090370 | ER-associated protein (Reticulon) | 0.07 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
CC | GO:0005783 | endoplasmic reticulum | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
BP | GO:0006810 | transport | IEP | HCCA |
BP | GO:0006855 | xenobiotic transmembrane transport | IEP | HCCA |
MF | GO:0015291 | secondary active transmembrane transporter activity | IEP | HCCA |
MF | GO:0015297 | antiporter activity | IEP | HCCA |
MF | GO:0016853 | isomerase activity | IEP | HCCA |
MF | GO:0016872 | intramolecular lyase activity | IEP | HCCA |
MF | GO:0022804 | active transmembrane transporter activity | IEP | HCCA |
BP | GO:0042908 | xenobiotic transport | IEP | HCCA |
BP | GO:0051179 | localization | IEP | HCCA |
BP | GO:0051234 | establishment of localization | IEP | HCCA |
BP | GO:0055085 | transmembrane transport | IEP | HCCA |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR003388 | Reticulon | 9 | 139 |
No external refs found! |