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  5. AMTR_s00033p00240440

AMTR_s00033p00240440 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00033.257

Description : Protein translocation.endoplasmic reticulum.co-translational insertion system.Sec61 subcomplex.alpha subunit


Gene families : OG0001704 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001704_tree

Sequence : coding (download), protein (download)


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Type Description Actions
Neighborhood HRR: AMTR_s00033p00240440

Target Alias Description ECC score Gene Family Method Actions
Aop_g67755 No alias subunit alpha of co-translational insertion system Sec61... 0.02 OrthoFinder output from all 47 species
Azfi_s0215.g058396 No alias subunit alpha of co-translational insertion system Sec61... 0.03 OrthoFinder output from all 47 species
Ceric.06G086800.1 Ceric.06G086800 subunit alpha of co-translational insertion system Sec61... 0.03 OrthoFinder output from all 47 species
GSVIVT01007405001 No alias No description available 0.03 OrthoFinder output from all 47 species
Len_g28062 No alias subunit alpha of co-translational insertion system Sec61... 0.04 OrthoFinder output from all 47 species
Len_g53553 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g18549 No alias subunit alpha of co-translational insertion system Sec61... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0015031 protein transport IEA Interproscan
CC GO:0016020 membrane IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
MF GO:0016462 pyrophosphatase activity IEP HCCA
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP HCCA
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP HCCA
MF GO:0016887 ATP hydrolysis activity IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0017111 ribonucleoside triphosphate phosphatase activity IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR002208 SecY/SEC61-alpha 78 462
IPR019561 Translocon_Sec61/SecY_plug_dom 43 77
No external refs found!