1. Home
  2. Species
  3. Amborella trichopoda
  4. Sequence
  5. AMTR_s00033p00206270

AMTR_s00033p00206270 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00033.178

Description : Solute transport.carrier-mediated transport.CLC anion channel / anion:proton antiporter


Gene families : OG0000501 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000501_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00033p00206270
Cluster HCCA: Cluster_90

Target Alias Description ECC score Gene Family Method Actions
Adi_g003642 ATCLC-C, CLC-C anion channel / anion:proton antiporter *(CLC) &... 0.03 OrthoFinder output from all 47 species
Aev_g05149 ATCLC-C, CLC-C anion channel / anion:proton antiporter *(CLC) &... 0.03 OrthoFinder output from all 47 species
Aev_g41935 ATCLC-B, CLC-B anion channel / anion:proton antiporter *(CLC) &... 0.04 OrthoFinder output from all 47 species
MA_785982g0010 CLC-D, ATCLC-D anion channel / anion:proton antiporter (CLC) 0.03 OrthoFinder output from all 47 species
Mp3g25240.1 ATCLC-C, CLC-C anion channel / anion:proton antiporter (CLC) 0.02 OrthoFinder output from all 47 species
Nbi_g28470 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g12289 ATCLC-C, CLC-C anion channel / anion:proton antiporter *(CLC) &... 0.03 OrthoFinder output from all 47 species
Zm00001e037701_P003 CLC-A, ATCLC-A,... anion channel / anion:proton antiporter (CLC) 0.03 OrthoFinder output from all 47 species
Zm00001e040930_P001 ATCLC-C, CLC-C,... anion channel / anion:proton antiporter (CLC) 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005247 voltage-gated chloride channel activity IEA Interproscan
MF GO:0005515 protein binding IEA Interproscan
BP GO:0006821 chloride transport IEA Interproscan
CC GO:0016020 membrane IEA Interproscan
BP GO:0055085 transmembrane transport IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004386 helicase activity IEP HCCA
BP GO:0006855 xenobiotic transmembrane transport IEP HCCA
MF GO:0015291 secondary active transmembrane transporter activity IEP HCCA
MF GO:0015297 antiporter activity IEP HCCA
MF GO:0022804 active transmembrane transporter activity IEP HCCA
BP GO:0042908 xenobiotic transport IEP HCCA
MF GO:0140657 ATP-dependent activity IEP HCCA
InterPro domains Description Start Stop
IPR001807 Cl-channel_volt-gated 138 553
IPR000644 CBS_dom 700 749
IPR000644 CBS_dom 585 645
No external refs found!