AMTR_s00033p00009800 (PEPCK, PCK1,...)

Aliases : PEPCK, PCK1, evm_27.TU.AmTr_v1.0_scaffold00033.2

Description : Carbohydrate metabolism.gluconeogenesis.phosphoenolpyruvate carboxykinase

Gene families : OG0000744 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000744_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AMTR_s00033p00009800

Target	Alias	Description	ECC score	Gene Family Method
Als_g39609	PEPCK, PCK2	EC_4.1 carbon-carbon lyase & original description: none	0.02	OrthoFinder output from all 47 species
Als_g51814	PEPCK, PCK1	EC_4.1 carbon-carbon lyase & original description: none	0.02	OrthoFinder output from all 47 species
Aob_g22111	PEPCK, PCK1	phosphoenolpyruvate carboxykinase & original description: none	0.03	OrthoFinder output from all 47 species
Aspi01Gene64494.t1	PEPCK, PCK1,...	EC_4.1 carbon-carbon lyase & original description: none	0.02	OrthoFinder output from all 47 species
Azfi_s0512.g074919	PEPCK, PCK1	EC_4.1 carbon-carbon lyase & original description: CDS=273-2129	0.02	OrthoFinder output from all 47 species
Ceric.07G017900.1	PEPCK, PCK1,...	EC_4.1 carbon-carbon lyase & original description:...	0.03	OrthoFinder output from all 47 species
Sam_g37875	No alias	EC_4.1 carbon-carbon lyase & original description: none	0.03	OrthoFinder output from all 47 species
Solyc12g088160.3.1	PEPCK, PCK1,...	phosphoenolpyruvate carboxykinase	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004611	phosphoenolpyruvate carboxykinase activity	None	Extended
MF	GO:0004612	phosphoenolpyruvate carboxykinase (ATP) activity	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	Interproscan
BP	GO:0005975	carbohydrate metabolic process	None	Extended
BP	GO:0005996	monosaccharide metabolic process	None	Extended
BP	GO:0006006	glucose metabolic process	None	Extended
BP	GO:0006094	gluconeogenesis	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0016051	carbohydrate biosynthetic process	None	Extended
MF	GO:0016829	lyase activity	None	Extended
MF	GO:0016830	carbon-carbon lyase activity	None	Extended
MF	GO:0016831	carboxy-lyase activity	None	Extended
MF	GO:0017076	purine nucleotide binding	None	Extended
BP	GO:0019318	hexose metabolic process	None	Extended
BP	GO:0019319	hexose biosynthetic process	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044281	small molecule metabolic process	None	Extended
BP	GO:0044283	small molecule biosynthetic process	None	Extended
BP	GO:0046364	monosaccharide biosynthetic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
MF	GO:0016597	amino acid binding	IEP	HCCA
MF	GO:0016874	ligase activity	IEP	HCCA
MF	GO:0016879	ligase activity, forming carbon-nitrogen bonds	IEP	HCCA
MF	GO:0016884	carbon-nitrogen ligase activity, with glutamine as amido-N-donor	IEP	HCCA
MF	GO:0043177	organic acid binding	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR001272	PEP_carboxykinase_ATP	25	404

External Links

No external refs found!

AMTR_s00033p00009800 (PEPCK, PCK1,...)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation