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  5. AMTR_s00032p00238080

AMTR_s00032p00238080 (AtRLP4, RLP4,...)


Aliases : AtRLP4, RLP4, evm_27.TU.AmTr_v1.0_scaffold00032.270

Description : Receptor-like protein 4 OS=Arabidopsis thaliana


Gene families : OG0002295 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002295_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00032p00238080

Target Alias Description ECC score Gene Family Method Actions
Aop_g09847 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0014.g013670 No alias not classified & original description: CDS=281-2188 0.03 OrthoFinder output from all 47 species
Azfi_s0113.g045965 AtRLP4, RLP4 not classified & original description: CDS=346-2214 0.02 OrthoFinder output from all 47 species
Dcu_g03907 AtRLP4, RLP4 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g05656 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
LOC_Os01g04720.1 LOC_Os01g04720 Receptor-like protein 4 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
LOC_Os07g31840.1 AtRLP4, RLP4,... Receptor-like protein 4 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Lfl_g09432 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g10558 AtRLP4, RLP4 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g01638 AtRLP4, RLP4 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g11072 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g02285 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g01135 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Smo133089 No alias Receptor-like protein 4 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Solyc02g077850.3.1 AtRLP4, RLP4,... Receptor-like protein 4 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Zm00001e035049_P002 AtRLP4, RLP4,... Receptor-like protein 4 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003682 chromatin binding IEP HCCA
MF GO:0003684 damaged DNA binding IEP HCCA
MF GO:0003905 alkylbase DNA N-glycosylase activity IEP HCCA
MF GO:0004518 nuclease activity IEP HCCA
MF GO:0004519 endonuclease activity IEP HCCA
MF GO:0005215 transporter activity IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006259 DNA metabolic process IEP HCCA
BP GO:0006281 DNA repair IEP HCCA
BP GO:0006284 base-excision repair IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0006810 transport IEP HCCA
BP GO:0006950 response to stress IEP HCCA
BP GO:0006974 cellular response to DNA damage stimulus IEP HCCA
MF GO:0008725 DNA-3-methyladenine glycosylase activity IEP HCCA
BP GO:0009987 cellular process IEP HCCA
MF GO:0015399 primary active transmembrane transporter activity IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0016799 hydrolase activity, hydrolyzing N-glycosyl compounds IEP HCCA
MF GO:0016887 ATP hydrolysis activity IEP HCCA
MF GO:0019104 DNA N-glycosylase activity IEP HCCA
BP GO:0033554 cellular response to stress IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
MF GO:0042626 ATPase-coupled transmembrane transporter activity IEP HCCA
MF GO:0043733 DNA-3-methylbase glycosylase activity IEP HCCA
BP GO:0044260 cellular macromolecule metabolic process IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
BP GO:0050896 response to stimulus IEP HCCA
BP GO:0051179 localization IEP HCCA
BP GO:0051234 establishment of localization IEP HCCA
BP GO:0051716 cellular response to stimulus IEP HCCA
BP GO:0055085 transmembrane transport IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR001611 Leu-rich_rpt 444 463
IPR025875 Leu-rich_rpt_4 467 504
IPR024788 Malectin-like_Carb-bd_dom 30 363
No external refs found!