AMTR_s00029p00245860 (ATCBP80, ABH1, ENS,...)

Aliases : ATCBP80, ABH1, ENS, CBP80, evm_27.TU.AmTr_v1.0_scaffold00029.440

Description : RNA processing.RNA 5-end cap adding.CBP80-CBP20 mRNA Cap-Binding complex (CBC).CBP80 component

Gene families : OG0004633 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004633_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AMTR_s00029p00245860

Target	Alias	Description	ECC score	Gene Family Method
Aev_g03353	ATCBP80, ABH1, ENS, CBP80	component CBP80 of CBP80-CBP20 mRNA Cap-Binding complex...	0.02	OrthoFinder output from all 47 species
Ala_g18568	ATCBP80, ABH1, ENS, CBP80	component CBP80 of CBP80-CBP20 mRNA Cap-Binding complex...	0.02	OrthoFinder output from all 47 species
Aob_g18677	ATCBP80, ABH1, ENS, CBP80	component CBP80 of CBP80-CBP20 mRNA Cap-Binding complex...	0.03	OrthoFinder output from all 47 species
Dcu_g08222	ATCBP80, ABH1, ENS, CBP80	component CBP80 of CBP80-CBP20 mRNA Cap-Binding complex...	0.02	OrthoFinder output from all 47 species
Mp1g05560.1	ATCBP80, ABH1, ENS, CBP80	component CBP80 of CBP80-CBP20 mRNA Cap-Binding complex (CBC)	0.02	OrthoFinder output from all 47 species
Ppi_g03962	ATCBP80, ABH1, ENS, CBP80	component CBP80 of CBP80-CBP20 mRNA Cap-Binding complex...	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	IEA	Interproscan
MF	GO:0003723	RNA binding	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	IEA	Interproscan
BP	GO:0006139	nucleobase-containing compound metabolic process	None	Extended
BP	GO:0006725	cellular aromatic compound metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0016070	RNA metabolic process	IEA	Interproscan
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0046483	heterocycle metabolic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0090304	nucleic acid metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
BP	GO:1901360	organic cyclic compound metabolic process	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0003924	GTPase activity	IEP	HCCA
MF	GO:0005525	GTP binding	IEP	HCCA
BP	GO:0006886	intracellular protein transport	IEP	HCCA
BP	GO:0008104	protein localization	IEP	HCCA
BP	GO:0015031	protein transport	IEP	HCCA
MF	GO:0016462	pyrophosphatase activity	IEP	HCCA
MF	GO:0016817	hydrolase activity, acting on acid anhydrides	IEP	HCCA
MF	GO:0016818	hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides	IEP	HCCA
MF	GO:0017111	ribonucleoside triphosphate phosphatase activity	IEP	HCCA
MF	GO:0019001	guanyl nucleotide binding	IEP	HCCA
MF	GO:0032561	guanyl ribonucleotide binding	IEP	HCCA
BP	GO:0033036	macromolecule localization	IEP	HCCA
BP	GO:0045184	establishment of protein localization	IEP	HCCA
BP	GO:0046907	intracellular transport	IEP	HCCA
BP	GO:0051641	cellular localization	IEP	HCCA
BP	GO:0051649	establishment of localization in cell	IEP	HCCA
BP	GO:0070727	cellular macromolecule localization	IEP	HCCA
BP	GO:0071702	organic substance transport	IEP	HCCA
BP	GO:0071705	nitrogen compound transport	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR015174	MIF4G-like_typ-2	486	754
IPR015172	MIF4G-like_typ-1	345	468
IPR003890	MIF4G-like_typ-3	22	192

External Links

No external refs found!