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  5. AMTR_s00029p00243460

AMTR_s00029p00243460 (RCI4, CAX1, ATCAX1,...)


Aliases : RCI4, CAX1, ATCAX1, evm_27.TU.AmTr_v1.0_scaffold00029.427

Description : Solute transport.carrier-mediated transport.CDF superfamily.CaCA family.cation antiporter (CAX-type)


Gene families : OG0001218 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001218_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00029p00243460

Target Alias Description ECC score Gene Family Method Actions
Ehy_g15930 ATCAX5, CAX5 cation antiporter *(CAX) & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01016118001 ATCAX5, CAX5 Solute transport.carrier-mediated transport.CDF... 0.03 OrthoFinder output from all 47 species
Solyc03g123790.4.1 ATCAX5, CAX5,... cation antiporter (CAX) 0.04 OrthoFinder output from all 47 species
Solyc09g005260.4.1 CAX1-LIKE,... cation antiporter (CAX) 0.03 OrthoFinder output from all 47 species
Solyc12g011070.3.1 ATCAX5, CAX5,... cation antiporter (CAX) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0055085 transmembrane transport IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003905 alkylbase DNA N-glycosylase activity IEP HCCA
BP GO:0006259 DNA metabolic process IEP HCCA
BP GO:0006281 DNA repair IEP HCCA
BP GO:0006284 base-excision repair IEP HCCA
BP GO:0006950 response to stress IEP HCCA
BP GO:0006974 cellular response to DNA damage stimulus IEP HCCA
MF GO:0008725 DNA-3-methyladenine glycosylase activity IEP HCCA
MF GO:0016799 hydrolase activity, hydrolyzing N-glycosyl compounds IEP HCCA
MF GO:0019104 DNA N-glycosylase activity IEP HCCA
BP GO:0033554 cellular response to stress IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
MF GO:0043733 DNA-3-methylbase glycosylase activity IEP HCCA
BP GO:0050896 response to stimulus IEP HCCA
BP GO:0051716 cellular response to stimulus IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
InterPro domains Description Start Stop
IPR004837 NaCa_Exmemb 98 243
IPR004837 NaCa_Exmemb 287 415
No external refs found!