Aliases : evm_27.TU.AmTr_v1.0_scaffold00029.353
Description : RNA processing.RNA splicing.U1/U2/U4/U5-associated Sm accessory ribonucleoprotein complex.Sm-F component
Gene families : OG0002787 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002787_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: AMTR_s00029p00226370 | |
Cluster | HCCA: Cluster_80 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
Cre05.g241300 | No alias | RNA processing.RNA splicing.U1/U2/U4/U5-associated Sm... | 0.02 | OrthoFinder output from all 47 species | |
LOC_Os02g30624.2 | LOC_Os02g30624 | component LSm6 of U6-associated LSm accessory... | 0.02 | OrthoFinder output from all 47 species | |
Mp6g01610.1 | No alias | component Sm-F of U1/U2/U4/U5-associated Sm accessory... | 0.02 | OrthoFinder output from all 47 species | |
Smo228181 | RUXF | RNA processing.RNA splicing.U1/U2/U4/U5-associated Sm... | 0.03 | OrthoFinder output from all 47 species | |
Smo268399 | No alias | RNA processing.RNA splicing.U6-associated LSm accessory... | 0.02 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
No GO annotation available for this sequence |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
BP | GO:0016192 | vesicle-mediated transport | IEP | HCCA |
MF | GO:0016879 | ligase activity, forming carbon-nitrogen bonds | IEP | HCCA |
MF | GO:0016881 | acid-amino acid ligase activity | IEP | HCCA |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR001163 | LSM_dom_euk/arc | 11 | 73 |
No external refs found! |