1. Home
  2. Species
  3. Amborella trichopoda
  4. Sequence
  5. AMTR_s00029p00199970

AMTR_s00029p00199970 (BIP, BIP2,...)


Aliases : BIP, BIP2, evm_27.TU.AmTr_v1.0_scaffold00029.279

Description : Luminal-binding protein OS=Solanum lycopersicum


Gene families : OG0000109 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000109_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00029p00199970
Cluster HCCA: Cluster_30

Target Alias Description ECC score Gene Family Method Actions
AT1G09080 BIP3 Heat shock protein 70 (Hsp 70) family protein 0.03 OrthoFinder output from all 47 species
AT1G16030 Hsp70b heat shock protein 70B 0.02 OrthoFinder output from all 47 species
AT5G02490 No alias Heat shock protein 70 (Hsp 70) family protein 0.03 OrthoFinder output from all 47 species
AT5G02500 AT-HSC70-1,... heat shock cognate protein 70-1 0.02 OrthoFinder output from all 47 species
Adi_g015692 BIP1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g055293 BIP, BIP2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g076088 ATHSP70, HSP70 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g080770 BIP1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g082709 BIP1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g24576 BIP1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g09488 AT-HSC70-1,... not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g39943 AT-HSC70-1,... not classified & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0007.g010774 No alias not classified & original description: CDS=1-216 0.03 OrthoFinder output from all 47 species
Azfi_s0019.g015122 ATHSP70, HSP70 not classified & original description: CDS=1-1572 0.02 OrthoFinder output from all 47 species
Azfi_s0027.g023754 ATHSP70, HSP70 chaperone *(Hsp70) & original description: CDS=277-1974 0.03 OrthoFinder output from all 47 species
Cba_g06513 ATHSP70, HSP70 chaperone *(Hsp70) & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g52809 Hsp70b not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.05G100200.1 ATHSP70, HSP70,... not classified & original description: pacid=50578971... 0.04 OrthoFinder output from all 47 species
Ceric.05G100500.1 ATHSP70, HSP70,... chaperone *(Hsp70) & original description:... 0.04 OrthoFinder output from all 47 species
Ceric.32G054900.1 BIP, BIP2,... not classified & original description: pacid=50598653... 0.03 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000241.33 BIP, BIP2 External stimuli response.temperature.Hsp... 0.02 OrthoFinder output from all 47 species
Dac_g41592 ERD2, HSP70T-1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g24119 ATHSP70, HSP70 not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01019607001 BIP, BIP2 External stimuli response.temperature.Hsp... 0.02 OrthoFinder output from all 47 species
GSVIVT01023641001 ATHSP70, HSP70 Heat shock 70 kDa protein OS=Glycine max 0.03 OrthoFinder output from all 47 species
GSVIVT01024994001 ATHSP70, HSP70 Heat shock cognate 70 kDa protein 2 OS=Solanum lycopersicum 0.03 OrthoFinder output from all 47 species
GSVIVT01034194001 ATHSP70, HSP70 No description available 0.03 OrthoFinder output from all 47 species
GSVIVT01034195001 ERD2, HSP70T-1 Heat shock cognate 70 kDa protein 2 OS=Solanum lycopersicum 0.03 OrthoFinder output from all 47 species
GSVIVT01038580001 BIP, BIP2 External stimuli response.temperature.Hsp... 0.02 OrthoFinder output from all 47 species
Gb_00216 BIP, BIP2 Heat shock 70 kDa protein BIP1 OS=Oryza sativa subsp.... 0.03 OrthoFinder output from all 47 species
Gb_11391 ATHSP70, HSP70 Probable mediator of RNA polymerase II transcription... 0.05 OrthoFinder output from all 47 species
Gb_12488 ATHSP70, HSP70 Probable mediator of RNA polymerase II transcription... 0.04 OrthoFinder output from all 47 species
Gb_14198 ATHSP70, HSP70 chaperone (Hsp70) 0.02 OrthoFinder output from all 47 species
Gb_19273 ATHSP70, HSP70 Heat shock 70 kDa protein OS=Glycine max... 0.03 OrthoFinder output from all 47 species
Gb_29748 ATHSP70, HSP70 Heat shock cognate 70 kDa protein OS=Petunia hybrida... 0.04 OrthoFinder output from all 47 species
LOC_Os05g30480.1 BIP, BIP2, LOC_Os05g30480 Heat shock 70 kDa protein BIP3 OS=Oryza sativa subsp.... 0.02 OrthoFinder output from all 47 species
LOC_Os06g10990.1 BIP1, LOC_Os06g10990 Luminal-binding protein 4 OS=Nicotiana tabacum... 0.03 OrthoFinder output from all 47 species
Lfl_g23161 ATHSP70, HSP70 chaperone *(Hsp70) & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g25034 AT-HSC70-1,... not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g26637 ATHSP70, HSP70 not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_10436544g0020 ATHSP70, HSP70 Heat shock cognate 70 kDa protein OS=Petunia hybrida... 0.03 OrthoFinder output from all 47 species
MA_160636g0010 ATHSP70, HSP70 Probable mediator of RNA polymerase II transcription... 0.03 OrthoFinder output from all 47 species
Msp_g20736 ATHSP70, HSP70 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g29386 AT-HSC70-1,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g63141 ATHSP70, HSP70 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g05227 ATHSP70, HSP70 chaperone *(Hsp70) & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g11311 No alias chaperone *(Hsp70) & original description: none 0.05 OrthoFinder output from all 47 species
Sam_g11312 No alias chaperone *(Hsp70) & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g34610 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Smo443120 AT-HSC70-1,... External stimuli response.temperature.Hsp... 0.02 OrthoFinder output from all 47 species
Solyc03g082920.4.1 BIP, BIP2, Solyc03g082920 Luminal-binding protein 5 OS=Nicotiana tabacum... 0.03 OrthoFinder output from all 47 species
Solyc06g005440.1.1 Solyc06g005440 Heat shock cognate 70 kDa protein OS=Petunia hybrida... 0.02 OrthoFinder output from all 47 species
Solyc11g066060.3.1 ATHSP70, HSP70,... chaperone (Hsp70) 0.02 OrthoFinder output from all 47 species
Solyc12g042560.3.1 Hsp70b, Solyc12g042560 Heat shock 70 kDa protein 5 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
Spa_g02575 BIP1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g12193 BIP1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g15806 ATHSP70, HSP70 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g49584 BIP, BIP2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g50212 BIP1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g55767 AT-HSC70-1,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g26739 ATHSP70, HSP70 chaperone *(Hsp70) & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000272 polysaccharide catabolic process IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003712 transcription coregulator activity IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0003924 GTPase activity IEP HCCA
MF GO:0004402 histone acetyltransferase activity IEP HCCA
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP HCCA
MF GO:0004560 alpha-L-fucosidase activity IEP HCCA
MF GO:0004857 enzyme inhibitor activity IEP HCCA
MF GO:0005216 monoatomic ion channel activity IEP HCCA
MF GO:0005515 protein binding IEP HCCA
BP GO:0005975 carbohydrate metabolic process IEP HCCA
BP GO:0006352 DNA-templated transcription initiation IEP HCCA
BP GO:0007155 cell adhesion IEP HCCA
MF GO:0008080 N-acetyltransferase activity IEP HCCA
MF GO:0015267 channel activity IEP HCCA
MF GO:0015928 fucosidase activity IEP HCCA
BP GO:0016052 carbohydrate catabolic process IEP HCCA
MF GO:0016160 amylase activity IEP HCCA
MF GO:0016161 beta-amylase activity IEP HCCA
MF GO:0016407 acetyltransferase activity IEP HCCA
MF GO:0016410 N-acyltransferase activity IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP HCCA
MF GO:0016987 sigma factor activity IEP HCCA
MF GO:0022803 passive transmembrane transporter activity IEP HCCA
MF GO:0034212 peptide N-acetyltransferase activity IEP HCCA
BP GO:0042545 cell wall modification IEP HCCA
BP GO:0045229 external encapsulating structure organization IEP HCCA
BP GO:0055114 obsolete oxidation-reduction process IEP HCCA
MF GO:0061733 peptide-lysine-N-acetyltransferase activity IEP HCCA
BP GO:0071554 cell wall organization or biogenesis IEP HCCA
BP GO:0071555 cell wall organization IEP HCCA
MF GO:0140110 transcription regulator activity IEP HCCA
MF GO:0140678 molecular function inhibitor activity IEP HCCA
InterPro domains Description Start Stop
IPR013126 Hsp_70_fam 52 331
No external refs found!