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  5. AMTR_s00029p00088380

AMTR_s00029p00088380 (YSL7,...)


Aliases : YSL7, evm_27.TU.AmTr_v1.0_scaffold00029.80

Description : Probable metal-nicotianamine transporter YSL5 OS=Arabidopsis thaliana


Gene families : OG0000334 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000334_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00029p00088380

Target Alias Description ECC score Gene Family Method Actions
Adi_g023430 YSL6 ferric cation-chelator transporter *(YSL) & original... 0.02 OrthoFinder output from all 47 species
Als_g29345 YSL5, PDE321 ferric cation-chelator transporter *(YSL) & original... 0.03 OrthoFinder output from all 47 species
Aspi01Gene29925.t1 YSL6, Aspi01Gene29925 ferric cation-chelator transporter *(YSL) & original... 0.02 OrthoFinder output from all 47 species
Aspi01Gene52242.t1 YSL6, Aspi01Gene52242 ferric cation-chelator transporter *(YSL) & original... 0.02 OrthoFinder output from all 47 species
Dac_g37280 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01012035001 YSL7 Nutrient uptake.iron uptake.chelation-based strategy... 0.04 OrthoFinder output from all 47 species
GSVIVT01019646001 ATYSL1, YSL1 Nutrient uptake.iron uptake.chelation-based strategy... 0.03 OrthoFinder output from all 47 species
LOC_Os02g42220.1 YSL7, LOC_Os02g42220 iron chelator transporter (YSL). ferric cation-chelator... 0.03 OrthoFinder output from all 47 species
LOC_Os02g43370.2 ATYSL3, YSL3,... iron chelator transporter (YSL). ferric cation-chelator... 0.03 OrthoFinder output from all 47 species
LOC_Os04g45900.1 ATYSL2, YSL2,... iron chelator transporter (YSL). ferric cation-chelator... 0.03 OrthoFinder output from all 47 species
LOC_Os05g16290.1 YSL7, LOC_Os05g16290 iron chelator transporter (YSL). ferric cation-chelator... 0.02 OrthoFinder output from all 47 species
Sam_g16877 No alias iron chelator transporter *(YSL) & original description: none 0.01 OrthoFinder output from all 47 species
Sam_g30797 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e007544_P001 YSL7, Zm00001e007544 iron chelator transporter (YSL). ferric cation-chelator... 0.03 OrthoFinder output from all 47 species
Zm00001e023053_P001 YSL7, Zm00001e023053 iron chelator transporter (YSL). ferric cation-chelator... 0.06 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0055085 transmembrane transport IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
CC GO:0005634 nucleus IEP HCCA
CC GO:0043227 membrane-bounded organelle IEP HCCA
CC GO:0043231 intracellular membrane-bounded organelle IEP HCCA
MF GO:0046983 protein dimerization activity IEP HCCA
MF GO:0140110 transcription regulator activity IEP HCCA
InterPro domains Description Start Stop
IPR004813 OPT 44 118
No external refs found!